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blackshadow 2017/09/09
"The global next-generation sequencing (NGS) services market is expected to reach USD 2,748.6 Million by 2022 from USD 1,059.2 Million in 2017, growing at a CAGR of 21.0% during the forecast period"

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10X Genomics at AGBT
By Aaron Krol February 25, 2015 | The Advances in Genome Biology & Techno logy conference kicked off today, as hundreds of scientists and investors descended on the Marco Island Resort off Floridaâ€™s Gulf Coast for the premiere annual event in the world of commercial genomics. The AGBT conference has a reputation for splashy announcements â€” memorably including Oxford Nanoporeâ€™s somewhat premature un
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DNA SMART ChIP-Seq Kit

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Zacks Investment Research: Stock Research, Analysis, & Recommendations
blackshadow 2014/02/18
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461 BioInformatics

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Quartz-Seqã¯2013/4/23ç¾åœ¨ã€æœ€ã‚‚æ„Ÿåº¦ãŒé«˜ãæœ€ã‚‚å†ç¾æ€§ã®é«˜ã„1ç´°èƒžRNA-Seqæ³•ã§ã™ã€‚å®Ÿé¨“æ‰‹æ³•ã®é–‹ç™ºã§ã¯ã€å®šé‡æ€§ã‚’ä¸Šã’ã‚‹ã“ã¨ã‚’ä¸»ç›®çš„ã«ã€å•é¡Œã¨ãªã‚‹ãƒ‘ãƒ©ãƒ¡ãƒ¼ã‚¿ã‚’å…¨ã¦ã‚ã¶ã‚Šã ã—ã€æ”¹å–„ã‚’ã¯ã‹ã‚Šã¾ã—ãŸã€‚åˆ€é›å†¶ãŒåˆ€ã‚’é›ãˆã‚‹ã‚¤ãƒ¡ãƒ¼ã‚¸ã§ã™ã€‚ã²ãŸã™ã‚‰åˆ‡ã‚Œå‘³ï¼å®šé‡æ€§ã‚’æ±‚ã‚ã¾ã—ãŸã€‚ãƒ‡ãƒ¼ã‚¿è§£æžã®ãƒ—ãƒã¨ãŒã£ã¡ã‚Šçµ„ã‚“ã§é–‹ç™ºã—ãŸã“ã¨ã§ç·åˆçš„ã«å®Œæˆåº¦ã®é«˜ã„æ–¹æ³•ã«ãªã£ãŸã¨æ€ã„ã¾ã™ã€‚å®Ÿé¨“ç ”ç©¶è€…ã¨ã—ã¦ã€å®Ÿé¨“æ‰‹æ³•ã‚’é–‹ç™ºã—ä¸–ã«é€ã‚Šå‡ºã›ãŸã“ã¨ã¯éžå¸¸ã«å–œã°ã—ã„ã“ã¨ã§ã™ã€‚ Quartz-Seqã®åå‰ã®ç”±æ¥ã®è©±ã§ã™ãŒã€Quantitative amplification forÂ RNAzã®ç•¥ãŒQuarzã§ã€è‹±èªžã§ã®Quartzã®ãƒ‰ã‚¤ãƒ„èªžè¡¨è¨˜ã¨ãªã‚Šã¾ã™ã€‚zã¯ã‚®ãƒ¼ã‚¯ã§sã‚’zã¨ã„ã†å ´åˆãŒã‚ã‚‹ã‹ã‚‰ç½®æ›ã—ã¦ä½¿ã£ã¦ã„ã¾ã™ã€‚Quartzã¯æ°´æ™¶ã‚„ã‚¯ã‚ªãƒ¼ãƒ„æ™‚è¨ˆã¨ã„ã£ãŸæ„å‘³åˆã„ãŒã‚ã‚Šã€æ£ç¢ºæ€§ã‚’ã‚¤ãƒ¡ãƒ¼ã‚¸ã•ã›ã‚‹åå‰ã¨ãªã£ã¦ã„ã¾ã™ã€‚ æ£ç›´ã€ã‹ã£
blackshadow 2013/05/01
ã€ŽQuartz-Seqã¯2013/4/23ç¾åœ¨ã€æœ€ã‚‚æ„Ÿåº¦ãŒé«˜ãæœ€ã‚‚å†ç¾æ€§ã®é«˜ã„1ç´°èƒžRNA-Seqæ³•ã§ã™ã€

400 science

464 RNA

651 NGS
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http://genaport.genaris.com/GOC_sequencer_post.php?eid=00067
blackshadow 2012/12/26
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g86 has gone.
The g86.dbcls.jp server is temporally unavailable. We're aware of and working on it. If you are looking for free and cc-by media contents, visit TogoTV/Picture Gallery. Thanks!
blackshadow 2012/11/19
461 BioInformatics

651 NGS
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Bowtie: An ultrafast, memory-efficient short read aligner
Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).
blackshadow 2012/11/01
Bowtie

461 BioInformatics

651 NGS
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TopHat :: Center for Bioinformatics and Computational Biology
tss_id and p_id GTF attributes that Cufflinks needs to perform differential splicing, CDS output, and promoter user analysis. We recommend that you download your Bowtie indexes and annotation files from this page. More information about Illumina's iGenomes project can be found here. Organism Data source Version Size Last Modified
blackshadow 2012/11/01
"Illumina has provided the RNA-Seq user community with a set of genome sequence indexes (including Bowtie indexes) as well as GTF transcript annotation files."

461 BioInformatics

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651 NGS
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blackshadow 2012/10/24
400 science

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â—‹ã‚µãƒ³ãƒ—ãƒ«ãƒ‡ãƒ¼ã‚¿ã‚’ç”¨ã„ãŸè§£æž â—‹ãŠã‚ã‚Šã« â—‹ã¯ã˜ã‚ã« A.ã“ã®ã‚µã‚¤ãƒˆã«ã¤ã„ã¦ ä¸‹ã®å›³ã¯ã€DNAã‚·ãƒ¼ã‚±ãƒ³ã‚µãƒ¼1ãƒ©ãƒ³ã‚ãŸã‚Šã§ç”Ÿæˆã•ã‚Œã‚‹éºä¼åé…åˆ—ãƒ‡ãƒ¼ã‚¿é‡ã®å¹´æ¬¡å¤‰åŒ–ã‚’ç¤ºã—ã¦ã„ã¾ã™ã€‚ 2005å¹´ã‹ã‚‰çˆ†ç™ºçš„ã«ãƒ‡ãƒ¼ã‚¿é‡ãŒå¢—ãˆã¦ã„ã‚‹ã“ã¨ãŒã²ã¨ç›®ã§åˆ†ã‹ã‚‹ã¨æ€ã„ã¾ã™ãŒã€ã“ã‚Œã¯ã€æ¬¡ä¸–ä»£ã‚·ãƒ¼ã‚±ãƒ³ã‚µãƒ¼æŠ€è¡“ã®é–‹ç™ºã«ã‚ˆã‚‹ã‚‚ã®ã§ã™ã€‚ ä¸€æ–¹ã§ã€å¤§é‡ã«ç”Ÿæˆã•ã‚ŒãŸãƒ‡ãƒ¼ã‚¿ã‚’è§£æžã™ã‚‹ãŸã‚ã®æŠ€è¡“ã¯ã€å°‚é–€æ€§ãŒé«˜ã¾ã£ã¦ãŠã‚Šã€å¿…è¦ãªæƒ…å ±ã‚’é›†ã‚ã‚ˆã†ã¨æ€ã£ã¦ã‚‚å‰æçŸ¥è˜ã‚’è¦ã™ã‚‹ã‚‚ã®ãŒå¤šã‹ã£ãŸã‚Šã€æ—¥æœ¬èªžã®æƒ…å ±ãŒå°‘ãªã‹ã£ãŸã‚Šã€ã¨ã„ã†çŠ¶æ³ã®ãŸã‚ã€ã‚„ã‚„æ•·å±…ãŒé«˜ããªã£ã¦ã„ã‚‹æ„ŸãŒã‚ã‚Šã¾ã™ã€‚ æœ¬ã‚³ãƒ³ãƒ†ãƒ³ãƒ„ã§ã¯ã€æ¬¡ä¸–ä»£ã‚·ãƒ¼ã‚±ãƒ³ã‚µãƒ¼ã®ã‚¢ãƒ—ãƒªã‚±ãƒ¼ã‚·ãƒ§ãƒ³ã®ä¸€ã¤ã§ã‚ã‚‹ã€Œã‚¨ã‚¯ã‚½ãƒ¼ãƒ è§£æžã€ã®æ–¹æ³•ã«ã¤ã„ã¦ã€ç§è‡ªèº«ã€ã‚³ãƒžãƒ³ãƒ‰ãƒ©ã‚¤ãƒ³ã‚’ä½¿ã£ãŸè§£æžã«ã¤ã„ã¦ã®çŸ¥è˜ãŒæ®†ã©ãªã„ä¸ã‹ã‚‰å¦ã‚“ã çµŒé¨“ã‚’ç”Ÿã‹ã—ã¦ã€ã§ãã‚‹ã ã‘åˆ†ã‹ã‚Šã‚„ã™ãã€è§£èª¬ã—ãŸã„ã¨æ€ã„ã¾ã™ã€‚ B.ã‚¨ã‚¯ã‚½ãƒ¼ãƒ è§£æžã¨ã¯ æ¬¡ä¸–ä»£ã‚·ãƒ¼
blackshadow 2012/07/27
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SNAP - Scalable Nucleotide Alignment Program - Microsoft Research
SNAP is a program that is part of a gene sequencing pipeline.Â It takes data from gene sequencing hardware that consists of short chunks of DNA (typically 70-300 base pairs long) called reads and determines where, how well and how unambiguously they match to a given reference genome.Â This is a computationally challenging probl em because reference genomes are big (the human genome is over 3 billio
blackshadow 2012/07/20
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DBCLS SRA
DBCLS SRA ã¯æ›´æ–°ã‚’åœæ¢ã—ã¦ã„ã¾ã™ã€‚DDBJ Search (https://ddbj.nig.ac.jp/search) ã‚’ãŠä½¿ã„ãã ã•ã„
blackshadow 2011/04/28
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