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GitHub - pbnjay/lollipops: This is the development fork - Stable code has been moved to ==>
ma_ko 2017/06/21
bioinformatics

Exome

visualization
ãƒªãƒ³ã‚¯
Automatic IGV snapshot script
ma_ko 2017/03/23
bioinformatics

ngs

visualization
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How To Create Mutation Diagram In R Or In Any Tools?
Please let me know any tools or R packages that can create a mutation diagram showing mutations in protein domains like this figure from the MSKCC cBio Cancer Genomic Portal? Thanks in advance
ma_ko 2017/03/23
bioinformatics

visualization

R
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Pythonã§Pandasã®Plotæ©Ÿèƒ½ã‚’ä½¿ãˆã°ãƒ‡ãƒ¼ã‚¿åŠ å·¥ã‹ã‚‰ã‚°ãƒ©ãƒ•ä½œæˆã¾ã§ãƒžã‚¸ã§ã‚·ãƒ¼ãƒ ãƒ¬ã‚¹ - Qiita
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ma_ko 2016/03/02
python

visualization
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XVIVO Scientific Animation | Medical Animation | Medical Illustrations XVIVO
We work across a wide range of scientific disciplines to create customÂ medical animationsÂ for biotech, pharmaceutical and educational institutions. From Mechanism of Disease animation (MOD) to marketing-driven Mechanism of Action (MOA) animation, we take sophisticated scientific and medical concepts and turn them into clear and detailed core visuals with cutting-edge cinematography and engaging na
ma_ko 2015/10/14
Science

visualization
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Alex Tirabasso
Science animations, illustrations and multimedia from the Canadian Museum of Nature and from other institutionsCreating the link between natural world, scien...
ma_ko 2015/03/27
Science

visualization

å‹•ç”»
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ggbio - Visualize genomic data - Easy Guides - Wiki - STHDA
Building your first track In this chapter, you will learn : Ë†1.How to add ideogram track. Ë†2. How to add gene model track. 4. How to add reference track 3. How to add track from bam files to visualize coverage and mismatch summary. 4. How to add track for vcf file to visualize variants Add ideogram track : Plot single chromosome with cytoband hg19, hg18, mm10, mm9 as been built inside, so you don'
ma_ko 2014/12/13
R

visualization
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Post by @4ub Â· 1 image
ma_ko 2014/12/13
Genetics

visualization

R
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Introducing ggvis - Posit
Posit empowers data scientists to use the open-source tools they know and love with the centralized management, security, and support they need at work.
ma_ko 2014/11/20
R

visualization
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Google Chart APIã‚’ä½¿ã£ã¦ã¿ã‚‹(ãã®ï¼’ ãƒ™ãƒ³å›³) - ã‚ã‚‚ã„ã‹
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ma_ko 2014/11/03
google

visualization
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Deleted articles cannot be recovered. Draft of this article would be also deleted. Are you sure you want to delete this article? ã“ã®ã‚·ãƒªãƒ¼ã‚ºã¯ã€Cytoscapeã‚’ä½¿ã£ã¦ã‚„IPython Notebookã€Pandasãªã©ã®ã‚ªãƒ¼ãƒ—ãƒ³ã‚½ãƒ¼ã‚¹ãƒ„ãƒ¼ãƒ«ã‚’åˆ©ç”¨ã—ã€å…¬é–‹ãƒ‡ãƒ¼ã‚¿ã‚’å…ƒã«å®Ÿéš›ã®ã‚°ãƒ©ãƒ•å¯è¦–åŒ–ã‚’è¡Œã†éŽç¨‹ã‚’ç´¹ä»‹ã™ã‚‹ã€å¯è¦–åŒ–ã®å®Ÿè·µè€…å‘ã‘ã®è¨˜äº‹ã§ã™ã€‚ ç¬¬ä¸€å›ž ç¬¬äºŒå›ž ç¬¬ä¸‰å›ž ç¬¬å››å›ž Cytoscapeã‚’ä½¿ã£ãŸå®Ÿéš›ã®å¯è¦–åŒ–ä½œæ¥ã®æµã‚Œ ã¯ã˜ã‚ã« èª°ã«ã§ã‚‚é¦´æŸ“ã¿ã®ã‚ã‚‹å…¬é–‹ãƒ‡ãƒ¼ã‚¿ã‚’ä½¿ã£ã¦å˜ç´”ãªä¾‹ã‚’ä½œã‚ã†ã¨æ€ã„å§‹ã‚ãŸä»Šå›žã®ä½œæ¥ã§ã™ãŒã€æ€ã„ã®ã»ã‹ãƒ‡ãƒ¼ã‚¿åŠ å·¥ãŒé¢å€’ã§ã€å®Ÿéš›ã®å¯è¦–åŒ–ä½œæ¥ã®è§£èª¬ã¾ã§æ™‚é–“ãŒã‹ã‹ã£ã¦ã—ã¾ã„ã¾ã—ãŸã€‚ä»Šå›žã¯ã„ã‚ˆã„ã‚ˆPythonã‚¹ã‚¯ãƒªãƒ—ãƒˆã‹ã‚‰å‡ºåŠ›ã•ã‚ŒãŸãƒ‡ãƒ¼ã‚¿ã‚’ä½¿ã„ã€ãƒ•ã‚¡
ma_ko 2014/09/24
visualization

Cytoscape
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ã‚µãƒ¼ãƒ“ã‚¹çµ‚äº†ã®ãŠçŸ¥ã‚‰ã›
ã‚µãƒ¼ãƒ“ã‚¹çµ‚äº†ã®ãŠçŸ¥ã‚‰ã› ã„ã¤ã‚‚Yahoo! JAPANã®ã‚µãƒ¼ãƒ“ã‚¹ã‚’ã”åˆ©ç”¨ã„ãŸã ãèª ã«ã‚ã‚ŠãŒã¨ã†ã”ã–ã„ã¾ã™ã€‚ ãŠå®¢æ§˜ãŒã‚¢ã‚¯ã‚»ã‚¹ã•ã‚ŒãŸã‚µãƒ¼ãƒ“ã‚¹ã¯æœ¬æ—¥ã¾ã§ã«ã‚µãƒ¼ãƒ“ã‚¹ã‚’çµ‚äº†ã„ãŸã—ã¾ã—ãŸã€‚ ä»Šå¾Œã¨ã‚‚Yahoo! JAPANã®ã‚µãƒ¼ãƒ“ã‚¹ã‚’ã”æ„›é¡§ãã ã•ã„ã¾ã™ã‚ˆã†ã€ã‚ˆã‚ã—ããŠé¡˜ã„ã„ãŸã—ã¾ã™ã€‚
ma_ko 2014/08/15
visualization

perl
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CircosAPI | Installing Circos on OS X
Installing Circos on OS X Installing Circos on Mac is a probl em for many new users. This guide provides you the step-by-step guide that helps you install Circos on your Mac (tested on OS X 10.8). Package Manager for OS X Homebrew is all you need for your Unix adventure, whether you want to learn to code or just use it for Circos. It is basically a package manager that allows you to download librar
ma_ko 2014/08/15
perl

visualization
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ãƒãƒƒãƒˆãƒ¯ãƒ¼ã‚¯å¯è¦–åŒ–ãƒ—ãƒ©ãƒƒãƒˆãƒ•ã‚©ãƒ¼ãƒ Cytoscapeã®ç¾çŠ¶ã¾ã¨ã‚ - Qiita
Deleted articles cannot be recovered. Draft of this article would be also deleted. Are you sure you want to delete this article? Cytoscapeã¨ã¯ï¼Ÿ Cytoscapeã¨ã¯ã€æ¬§ç±³ã®ç ”ç©¶æ©Ÿé–¢ã«ã‚ˆã£ã¦é–‹ç™ºã•ã‚Œã¦ã„ã‚‹ã‚ªãƒ¼ãƒ—ãƒ³ã‚½ãƒ¼ã‚¹ã®ãƒãƒƒãƒˆãƒ¯ãƒ¼ã‚¯å¯è¦–åŒ–ã‚½ãƒ•ãƒˆã‚¦ã‚§ã‚¢ãƒ—ãƒ©ãƒƒãƒˆãƒ•ã‚©ãƒ¼ãƒ ã§ã™ã€‚ãƒãƒƒãƒˆãƒ¯ãƒ¼ã‚¯ï¼ˆæ•°å¦ã®ç”¨èªžã§ã¯ã‚°ãƒ©ãƒ•ï¼‰å¯è¦–åŒ–ã‚½ãƒ•ãƒˆã‚¦ã‚§ã‚¢ã¨ã¯ã€è¦ã™ã‚‹ã«ãƒ‡ãƒ¼ã‚¿ã‚’åˆ†æžã—ã¦ã€æœ€çµ‚çš„ã«ã¯ä»¥ä¸‹ã®æ§˜ãªæç”»ã‚’è¡Œã†ã‚‚ã®ã§ã™ã€‚ å…ƒã¨ãªã‚‹æƒ…å ±ã¯åŸºæœ¬çš„ã«ä½•ã§ã‚‚è‰¯ã„ã®ã§ã€ä»¥ä¸‹ã®æ§˜ãªåˆ†é‡Žã§åˆ©ç”¨ã•ã‚Œã¦ã„ã¾ã™: éºä¼åãƒãƒƒãƒˆãƒ¯ãƒ¼ã‚¯åˆ†æžï¼ˆä¸»ãªé–‹ç™ºç›®çš„ã§ã™ï¼‰ ã‚½ãƒ¼ã‚·ãƒ£ãƒ«ãƒãƒƒãƒˆãƒ¯ãƒ¼ã‚¯åˆ†æžï¼ˆæ—¥æœ¬èªžã§ã‚‚å¹¾ã¤ã‹è‘—ä½œã®ã‚ã‚‹James Fowleræ•™æŽˆã«ã‚‚å”åŠ›ã—ã¦ã„ãŸã ã„ã¦ã„ã¾ã™ï¼‰ ã‚³ãƒ³ãƒ”ãƒ¥ãƒ¼ã‚¿ãƒ»ãƒãƒƒãƒˆãƒ¯ãƒ¼ã‚¯ã®
ma_ko 2014/08/09
visualization

Cytoscape
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Markov Chains
Markov chains, named after Andrey Markov, are mathematical systems that hop from one "state" (a situation or set of values) to another. For example, if you made a Markov chain model of a baby's behavior, you might include "playing," "eating", "sleeping," and "crying" as states, which together with other behaviors could form a 'state space': a list of all possible states. In addition, on top of the
ma_ko 2014/08/06
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stat

algorithm

visualization
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ma_ko 2014/07/07
ã‚¤ãƒ³ãƒ•ã‚©ã‚°ãƒ©ãƒ•ã‚£ãƒƒã‚¯

visualization
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Google Code Archive - Long-term storage for Google Code Project Hosting.
ma_ko 2014/02/25
Cytoscape

visualization

pathway
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What Is The Best Way To Calculate The Distance Between Two Proteins?
ma_ko 2014/02/24
igraph

R

visualization

Cytoscape
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How To Show A Ppi Subnetwork/Cluster Is Not Obtained By Random Chance?
ma_ko 2014/02/24
igraph

R

visualization
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ma_ko 2014/02/24
igraph

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