RASTA-Bacteria: a web-based tool for identifying toxin-antitoxin loci in prokaryotes (Q21184115)

Europe PubMed Central

title

RASTA-Bacteria: a web-based tool for identifying toxin-antitoxin loci in prokaryotes (English)

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Emeric W Sevin

1

Emeric W

Sevin

1 reference

PubMed publication ID

17678530

11 July 2022

Frédérique Barloy-Hubler

series ordinal

2

author given names

Frédérique

author last names

Barloy-Hubler

1 reference

PubMed publication ID

17678530

The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide

11 July 2022

language of work or name

English

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publication date

2007

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published in

Genome Biology

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volume

8

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issue

8

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page(s)

R155

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cites work

1 reference

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19 March 2017

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An Escherichia coli chromosomal "addiction module" regulated by guanosine [corrected] 3',5'-bispyrophosphate: a model for programmed bacterial cell death

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Toxins-antitoxins: plasmid maintenance, programmed cell death, and cell cycle arrest

19 March 2017

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Addiction modules and programmed cell death and antideath in bacterial cultures

19 March 2017

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Antisense RNA-regulated programmed cell death

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Prokaryotic toxin-antitoxin stress response loci

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The HicAB cassette, a putative novel, RNA-targeting toxin-antitoxin system in archaea and bacteria

7 April 2017

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Ectopic overexpression of wild-type and mutant hipA genes in Escherichia coli: effects on macromolecular synthesis and persister formation

12 September 2017

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The PIN-domain toxin-antitoxin array in mycobacteria

12 September 2017

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The biology of restriction and anti-restriction

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12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

1 reference

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Characterization of a novel toxin-antitoxin module, VapBC, encoded by Leptospira interrogans chromosome

12 September 2017

1 reference

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Modular organization of the Phd repressor/antitoxin protein

12 September 2017

1 reference

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The Escherichia coli mazEF suicide module mediates thymineless death

12 September 2017

1 reference

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The composite genome of the legume symbiont Sinorhizobium meliloti

12 September 2017

1 reference

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Postsegregational killing mediated by the P1 phage "addiction module" phd-doc requires the Escherichia coli programmed cell death system mazEF.

12 September 2017

1 reference

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Programmed cell death in Escherichia coli: some antibiotics can trigger mazEF lethality

12 September 2017

1 reference

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Occurrence of mazEF-like antitoxin/toxin systems in bacteria

12 September 2017

1 reference

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Plasmid copy-number control and better-than-random segregation genes of pSM19035 share a common regulator

12 September 2017

1 reference

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A family of stability determinants in pathogenic bacteria

12 September 2017

1 reference

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Characterization of the stable maintenance properties of the par region of broad-host-range plasmid RK2.

12 September 2017

1 reference

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chpA and chpB, Escherichia coli chromosomal homologs of the pem locus responsible for stable maintenance of plasmid R100

12 September 2017

1 reference

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Transcription of the stability operon of IncFII plasmid NR1

12 September 2017

1 reference

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12 September 2017

1 reference

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MazF-mediated cell death in Escherichia coli: a point of no return

12 September 2017

1 reference

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Escherichia coli mazEF-mediated cell death is triggered by various stressful conditions.

27 September 2017

1 reference

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27 September 2017

1 reference

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27 September 2017

1 reference

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Autoregulation of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis

27 September 2017

1 reference

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27 September 2017

1 reference

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Induction of Escherichia coli chromosomal mazEF by stressful conditions causes an irreversible loss of viability

27 September 2017

1 reference

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30 May 2018

1 reference

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The nucleotide sequence and characterization of the relA gene of Escherichia coli

30 May 2018

1 reference

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30 May 2018

1 reference

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Bacterial programmed cell death systems as targets for antibiotics.

29 November 2018

1 reference

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Characterization of the interactions within the mazEF addiction module of Escherichia coli.

29 November 2018

1 reference

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RelE toxins from bacteria and Archaea cleave mRNAs on translating ribosomes, which are rescued by tmRNA.

29 November 2018

1 reference

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29 November 2018

1 reference

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29 November 2018

1 reference

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29 November 2018

1 reference

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29 November 2018

1 reference

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29 November 2018

1 reference

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29 November 2018

1 reference

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29 November 2018

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12 December 2020

Gene product identification and promoter analysis of hig locus of plasmid Rts1

1 reference

12 December 2020

The Escherichia coli relBE genes belong to a new toxin-antitoxin gene family

1 reference

12 December 2020

Toxin-antitoxin systems homologous with relBE of Escherichia coli plasmid P307 are ubiquitous in prokaryotes

1 reference

12 December 2020

The Bacterial Toxin RelE Displays Codon-Specific Cleavage of mRNAs in the Ribosomal A Site

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Small open reading frames: not so small anymore

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The ntrPR operon of Sinorhizobium meliloti is organized and functions as a toxin-antitoxin module

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VapI, a new member of the Rhodococcus equi Vap family

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12 December 2020

Identifiers

DOI

10.1186/GB-2007-8-8-R155

1 reference

Dimensions Publication ID

1002444027

0 references

Fatcat ID

release_knaxp52cyvc3th255lbns2acmu

0 references

1 reference

1 reference

PubMed publication ID

17678530

1 reference