Skip to content
@RomeroLab

Romero Lab

Romero Lab at Duke University

Popular repositories Loading

  1. ML-Guided-Acyl-ACP-Reductase-Engineering ML-Guided-Acyl-ACP-Reductase-Engineering Public

    Repository containing scripts and analysis for ML-Guided Acyl-ACP Reductase Engineering paper

    Jupyter Notebook 10 4

  2. dhfr_neutral_evolution dhfr_neutral_evolution Public

    Jupyter Notebook 6

  3. schemarecomb schemarecomb Public

    Design chimeric protein libraries with Golden Gate Assembly.

    Python 5 2

  4. syringe-pump-controller syringe-pump-controller Public

    Python GUI to operate New Era syringe pumps

    Python 4 1

  5. SAMPLE_code SAMPLE_code Public

    Jupyter Notebook 4 1

  6. pudms pudms Public

    positive-unlabeled learning for dms datasets

    R 3 2

Repositories

Showing 10 of 18 repositories
  • Finetuning_ESM2 Public

    Finetuning ESM2 with multi-task data (regression and/or ordinal regression)

    RomeroLab/Finetuning_ESM2’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 23, 2024
  • nn-extrapolation Public

    Neural network extrapolation to distant regions of the protein fitness landscape

    RomeroLab/nn-extrapolation’s past year of commit activity
    Jupyter Notebook 2 GPL-3.0 0 0 0 Updated Jun 24, 2024
  • nn4dms_nn-extrapolate Public Forked from gitter-lab/nn4dms

    Neural networks for deep mutational scanning data

    RomeroLab/nn4dms_nn-extrapolate’s past year of commit activity
    Jupyter Notebook 0 MIT 17 0 0 Updated Jun 24, 2024
  • nn-extrapolation-models Public

    Pretrained models used in nn-extrapolation.

    RomeroLab/nn-extrapolation-models’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Jun 3, 2024
  • ML-Guided-Acyl-ACP-Reductase-Engineering Public

    Repository containing scripts and analysis for ML-Guided Acyl-ACP Reductase Engineering paper

    RomeroLab/ML-Guided-Acyl-ACP-Reductase-Engineering’s past year of commit activity
    Jupyter Notebook 10 GPL-3.0 4 2 0 Updated Nov 21, 2023
  • SAMPLE_code Public
    RomeroLab/SAMPLE_code’s past year of commit activity
    Jupyter Notebook 4 1 0 0 Updated Oct 27, 2023
  • alphafold Public Forked from google-deepmind/alphafold

    Open source code for AlphaFold.

    RomeroLab/alphafold’s past year of commit activity
    Python 0 Apache-2.0 2,312 0 0 Updated Oct 23, 2023
  • tutorials Public

    Romero lab tutorials and information for lab server and GitHub usage.

    RomeroLab/tutorials’s past year of commit activity
    0 0 0 0 Updated Sep 8, 2023
  • schemarecomb Public

    Design chimeric protein libraries with Golden Gate Assembly.

    RomeroLab/schemarecomb’s past year of commit activity
    Python 5 GPL-3.0 2 0 0 Updated Jul 8, 2023
  • dhfr_neutral_evolution Public
    RomeroLab/dhfr_neutral_evolution’s past year of commit activity
    Jupyter Notebook 6 MIT 0 0 0 Updated Feb 8, 2023
View all repositories

Top languages

Loading…

Most used topics

Loading…