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Iinger for proteomics data

Status: Open.

#331 In welch-lab/liger;

· jwang-lilly opened on Apr 23, 2025

scaleNotCenter Rcpp performance for dgCMatrix is impacted by unpruned zeroes

Status: Open.

#330 In welch-lab/liger;

· hsuknowledge opened on Apr 20, 2025

Package ‘rliger’ was removed from the CRAN repository

Status: Open.

#329 In welch-lab/liger;

· hsuknowledge opened on Apr 20, 2025

Cross-species integrated annotation

Status: Open.

#328 In welch-lab/liger;

· zuodabin opened on Apr 17, 2025

How to use liger in the mitigate effects of cell cycle heterogeneity

Status: Open.

#327 In welch-lab/liger;

· DINGQIA opened on Mar 13, 2025

How to find value of best k

Status: Open.

#326 In welch-lab/liger;

· karenlawwc opened on Feb 11, 2025

Error in UseMethod("runINMF", object) : no applicable method for 'runINMF' applied to an object of class "list"

Status: Open.

#325 In welch-lab/liger;

· wang0430 opened on Dec 25, 2024

Parameter optimization guidance for cross species integration

Status: Open.

#324 In welch-lab/liger;

· KaczorowskiLab opened on Nov 8, 2024

Error in ImputeKNN

Status: Open.

#313 In welch-lab/liger;

· kangjiajinlong opened on Jun 11, 2024

Error when performing the Wilcoxon test on the peak counts

Status: Open.

#312 In welch-lab/liger;

· zhangyz1997 opened on May 20, 2024

Query on building shared factor neighborhood graph

enhancementNew feature or requestNew feature or request

Status: Open.

#311 In welch-lab/liger;

· yuzhong1997 opened on May 16, 2024

Issue with loading old liger object via convertOldLiger function

Status: Open.

#307 In welch-lab/liger;

· ellenbouchard opened on Mar 23, 2024