📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.

Molecular simulation in Julia

A dependency-free cross-platform swiss army knife for PDB files.

Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.

A Julia package to read, write and manipulate macromolecular structures

A Julia package to analyze protein sequences, structures, and evolutionary information

The repository pymolschortucts contains the a collection of shortcuts that are loaded on startup of PyMOL. These shortcuts enable websearches from within PyMOL as well as many other convienent functions that make work in PyMOL more productive..

Calculation of interatomic interactions in molecular structures

This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the University of Milano, originally inspired by https://github.com/pb3lab/ibm3202

A tool for analyzing RAS protein structures

Benchmarking common tasks on proteins in various languages and packages

Python package to manage protein structures and their annotations

A Julia package to view macromolecular structures in the REPL, in a Jupyter notebook/JupyterLab or in Pluto

PACKMAN: PACKing and Motion ANalysis

Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.

Molstar as a react component

This repo is dedicated to make bioinformatics resources available for anyone who wish to enter this field. (You may find it useful or not useful based on your level). I am still embarking my path in the field, just posting things based on my knowledge and the things which worked for me personally, they may/may not work with you, totally fine.

Generate and perturb protein structural ensembles using the ExProSE algorithm

A fragment-based molecular assembly toolkit