Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science

cBioPortal for Cancer Genomics

Precision Medicine Knowledge Graph (PrimeKG)

TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools

TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design

ToolUniverse is a collection of biomedical tools designed for AI agents

High performance data storage for importing, querying and transforming variants.

Extended Joint Models for Longitudinal and Survival Data

📦 Non-parametric Causal Effects Based on Modified Treatment Policies 🔮

Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay

Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)

Unified Clinical Vocabulary Embeddings for Advancing Precision Medicine

Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer

mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data

An Artificial Neural Network-based discriminator for validating clinically significant genomic variants

Methods for subgroup identification / personalized medicine / individualized treatment rules

Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data

Text mining cancer biomarkers for the CIVIC database

Patient-Specific Modeling in Python

Initial data release for drug-target interactions of the cancer targetome.