A Go package for engineering organisms.

This repository contains data and code from the manuscript, "Analysis of biodiversity data suggests that species are hidden in predictable places".

Pipeline for building topologically-constrained phylogenies from DNA barcode data

An R package for pre-processing and error evaluation of COI-5P barcode data

Parser of BLAST results

DNA barcoding analysis pipeline

A sequence-by-sequence denoiser for COI DNA barcode and metabarcode data

Bioinformatic processes used to obtain invertebrate DNA barcodes from Illumina sequencing output

Files from DIMACS 2007 DNA barcoding challenge

Repository containing a python script for barcode gap plotting, as well as an example input-file for the script.

Iterative extrapolation of species haplotype accumulation curves for genetic diversity assessment.