An open source openEHR server

Personal Cancer Genome Reporter (PCGR)

面向中文电子病历的命名实体识别

MNE-CPP: A Framework for Electrophysiology

An electronic data capture platform for administering remote and in-person clinical instruments

Characterization of Germline variants

Clinically Adapted Model Enhanced from LLaMA

Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.

Medkey Hospital Information System main repository: Practice Management for Practicioners & Hospitals, EHR, Patient Engagement

Mutation Identification Pipeline. Read the latest documentation:

A collaborative learning framework for empowering biomedical research

Integrating AI to Clinical Workflow

A reported 96,480 people were diagnosed with melanoma in the United States in 2019, leading to 7230 reported deaths. Early-stage identification of suspicious pigmented lesions (SPLs) in primary care settings can lead to im- proved melanoma prognosis and a possible 20-fold reduction in treatment cost. Despite this clinical and economic value, eff…

Official source for Spanish pretrained biomedical and clinical language models and resources made @ BSC-TEMU within the "Plan de las Tecnologías del Lenguaje" (Plan-TL).

Reconstruction and analysis of viral and host genomes at multi-organ level

Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are developing.

Tool-set to support Bayesian evidence synthesis in R

This project develops compact transformer models tailored for clinical text analysis, balancing efficiency and performance for healthcare NLP tasks.

Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.