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biomedical-image-analysis

Here are 30 public repositories matching this topic...

sinAshish / Multi-Scale-Attention

Code for our paper "Multi-scale Guided Attention for Medical Image Segmentation"

deep-learning pytorch attention-mechanism encoder-decoder biomedical-image-analysis

Updated May 16, 2020
Python

DeepBrainSeg

koriavinash1 / DeepBrainSeg

Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks

deep-learning artificial-intelligence ensemble-learning segmentation brats medical-image-analysis deep-convolutional-neural-networks brain-segmentation brain-tumor brain-tumor-segmentation biomedical-image-analysis

Updated Aug 1, 2023
Python

anjanatiha / Pneumonia-Detection-from-Chest-X-Ray-Images-with-Deep-Learning

Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models

tensorflow keras medical-imaging imagenet image-recognition convolutional-neural-networks inception chest-xray-images medical-image-computing inceptionv3 image-detection deep-convolutional-networks biomedical-image-processing keras-tensorflow medical-image-processing medical-application medical-image-analysis biomedical-applications biomedical-image-analysis pneumonia-detection

Updated Dec 16, 2018
Jupyter Notebook

anjanatiha / Cancer-Detection-from-Microscopic-Tissue-Images-with-Deep-Learning

Cancer Detection from Microscopic Images by Fine-tuning Pre-trained Models ("Inception") for new class labels

deep-learning keras medical-imaging image-classification image-recognition medical-image-computing convolutional-neural-network biomedical-image-processing keras-tensorflow medical-image-processing medical-application cancer-detection medical-image-analysis biomedical-applications nasnet-models nasnet biomedical-image-analysis microscopic-images nasnetmobile

Updated Jun 4, 2020
Jupyter Notebook

sraashis / retinal-fundus-transfer

An example of easytorch implementation on retinal vessel segmentation.

transfer-learning vessel-segmentation u-net biomedical-image-analysis retinal-vessel-segmentation k-fold-cross-validation easy-neural-network-experiments pool-image-datasets u-net-pytorch pytorch-k-fold-cross-validation

Updated Jan 23, 2023
Python

cjerzak / causalimages-software

causalimages: An R package for performing causal inference with image and image sequence data

machine-learning computer-vision causal-inference earth-observation biomedical-image-analysis

Updated Nov 6, 2024
R

pramod-zillella / Brain-Tumor-Segmentation

Fully automatic brain tumor segmentation using the Modified 3DUNet architecture for Brats 2020 Challenge.

deep-learning medical-image-analysis brain-tumor-segmentation unet-3d biomedical-image-analysis brats-challenge

Updated Jun 29, 2021
Jupyter Notebook

luisvalesilva / wsipre

Handling whole-slide images with region-level annotations.

python-library biomedical-image-processing whole-slide-imaging virtual-slide biomedical-image-analysis

Updated Jan 14, 2019
Jupyter Notebook

yunyuntsai / BraTS-brain-tumer-segmentation

Code for brain tumor segmentaion

computer-vision pytorch brats brain-tumor-segmentation biomedical-image-analysis

Updated Nov 16, 2020
Jupyter Notebook

cpathology / NucleiSegHE

H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net

deep-learning whole-slide-imaging computational-pathology biomedical-image-analysis pathology-image nuclei-segmentation pathomics hover-net he-staining

Updated Jul 30, 2024
Python

AIandGlobalDevelopmentLab / causalimages-software

causalimages: An R package for performing causal inference with image and image sequence data

machine-learning computer-vision causal-inference biomedical-image-analysis

Updated Oct 7, 2023
R

awcasella / Imagens-Biomedicas-UNIFESP-SJC-EngBio

This repository contains all the image processing algorithms studied in discipline "Imagens Biomédicas" of Biomedical Engineering course at UNIFESP in the first semester of 2017. All the algorithms are written in both MatLab and Python Languages.

matlab image-processing python3 medical-imaging biomedical-image-processing biomedical-engineering medical-image-processing processamento-de-imagens unifesp biomedical-image-analysis processamento-digital-imagens processamento-digital-de-sinais engenharia-biomedica

Updated Mar 3, 2020
MATLAB

koriavinash1 / PAC18

sMRI based depression classification using 3D volumetric convolutional networks

ai deep-learning neuroscience artificial-intelligence classification convolutional-neural-networks biomedical-image-analysis ai-in-medicine depression-analysis

Updated Aug 30, 2018
Python

sweetpand / Tensorflow_Best_practices

Biomedical Image Analysis with TensorFlow and DLTK

tensorflow tensorflow-experiments biomedical-image-processing tensorflow-models biomedical-engineering dltk tensorflow-lite biomedical-image-analysis biomedical-signal-processing tensorflow-mri

Updated Apr 15, 2020
Python

awcasella / Calculo-Numerico-UNIFESP-SJC-EngBio

This repository contains all the algorithms studied in discipline "Calculo Numerico" of Biomedical Engineering course at UNIFESP in the second semester of 2018.

numerical-methods numerical-integration biomedical-image-processing biomedical-engineering numerical-algorithms unifesp calculo-numerico biomedical-data-science biomedical-applications biomedical-image-analysis biomedical-signal-processing engenharia-biomedica

Updated Mar 3, 2020
MATLAB

awcasella / Engenharia-Medica-Aplicada-UNIFESP-SJC-EngBio

This repository contains all the machine learning algorithms studied in discipline "Engenharia Médica Aplicada" of Biomedical Engineering course at UNIFESP in the second semester of 2018. All the algorithms are written in both MatLab and Python Languages.

python machine-learning matlab machine-learning-algorithms feature-selection feature-extraction dimensionality-reduction biomedical-image-processing biomedical-engineering unifesp biomedical-data-science biomedical-image-analysis biomedical-signal-processing classification-algorithms engenharia-biomedica

Updated Mar 3, 2020
MATLAB

mcha0019 / Cell-Detection-and-Segmentation

An entry to the ISBI 2021 Cell Tracking Challenge that uses a Mask R-CNN neural network to detect and segment cells in 2D and 3D microscopy

machine-learning bioinformatics computer-vision deep-learning convolutional-neural-networks image-segmentation biomedical-image-processing cell-segmentation biomedical-image-analysis

Updated Aug 8, 2022
Jupyter Notebook

amarrammadhu / Biomedical-Engineering-

My assignments and projects concerned with Biomedical Engineering

biomedical-informatics software-engineering biomedical-image-processing biomedical-engineering biomedical-data-science biomedical-image-analysis biomedical-research

Updated Aug 9, 2024
TeX

reshalfahsi / MSGNet

Modified MobileNet-ShuffleNet-GhostNet Network for Lightweight Retinal Vessel Segmentation

pytorch image-segmentation biomedical-image-processing biomedical-engineering medical-image-segmentation biomedical-image-analysis

Updated Jan 4, 2024
Python

anjanatiha / Malaria-Parasite-Detection-in-Thin-Blood-Smear-Images-with-Convolutional-Neural-Networks

Malaria Detection from Cell Images using Deep Learning - NasNetMobile Model

machine-learning deep-neural-networks computer-vision deep-learning medical-imaging image-classification image-recognition medical-image-computing convolutional-neural-network biomedical-image-processing medical-image-processing medical-application medical-image-analysis biomedical-applications nasnet biomedical-image-analysis nasnetmobile

Updated Apr 13, 2020
Jupyter Notebook

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