Robust, flexible and resource-efficient pipelines using Go and the commandline
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Updated
Aug 14, 2024 - Go
Robust, flexible and resource-efficient pipelines using Go and the commandline
A language and runtime for distributed, incremental data processing in the cloud
Compute over Data framework for public, transparent, and optionally verifiable computation
Rapid large-scale prokaryote pan genome analysis
Package for fetching metadata and downloading data from SRA/ENA/GEO
Analysis Pipeline for Single Cell ATAC-seq
Whole Genome Sequencing analysis, WGS analysis
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
Finds SNP sites from a multi-FASTA alignment file
GCP for Bioinformatics Researchers
A tool to circularize genome assemblies
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Antimicrobial Resistance Identification By Assembly
ATAC-seq and DNase-seq processing pipeline
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or lost.
Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.
NGLess: NGS with less work
WGBS/NOMe-seq Data Processing & Differential Methylation Analysis
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
Analyze your RNA sequencing data without writing a single line of code
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