Biorxiv: CAP-I
Each folder contains raw datasets, scripts, outputs.
| Figures | |
|---|---|
| Figure 1 | CAP-I Bait Design and Validation |
| Figure 2 | Reproducibility Test of RNA-CAP-I-seq |
| Figure 3 | Quantification of RNA-CAP-I-seq |
| Figure 4 | Correlation studies of RNA-CAP-I-seq from different genotypes and treatments |
| Supplementary Figures | |
|---|---|
| Figure S1 | Time-series expression of CAP-I genes under different conditions of immune activation |
| Figure S2 | CAP-I bait design and RNA-CAP-I-seq experimental design |
| Figure S3 | Overall quality assessment of RNA-CAP-I-seq data |
| Figure S4 | Heatmaps of differential gene expression of mutants individually compared to wt |
| Supplementary Tables | |
|---|---|
| Table S1 | Information_of_ERGs_and_Control_Genes_in_CAP-I |
| Table S2 | Time-series_Expression_of_CAP-I_genes |
| Table S3 | Coverage_Information_of_CAP-I_gDNA_seq_Trial |
| Table S4 | Read_Counts_of_RNA-CAP-I-seq_before_Normalisation |
| Table S5 | Read_Counts_of_RNA-CAP-I-seq_post_Normalisation |
| Table S6 | Log_Matrix_of_RNA-CAP-I-seq_Normalised_to_wt_un |
| Table S7 | Geno_Ontology_Information_for_Clusters_in_Differential_Gene_Expression_Heatmap |