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Delegate plots to spatialdata-plot

Status: Open.

#912 In scverse/squidpy;

· LucaMarconato opened on Nov 8, 2024

Add parameter to sliding_window to end up with windows of (approximately) same number of cells

enhancement ✨New feature or requestNew feature or request

featurePR introduces a new featurePR introduces a new feature

graph 🕸️

squidpy2.0Everything releated to a Squidpy 2.0 releaseEverything releated to a Squidpy 2.0 release

Status: Open.

#908 In scverse/squidpy;

· timtreis opened on Nov 4, 2024

Visium observation with NaN metadata

Status: Open.

#906 In scverse/squidpy;

· jychien opened on Oct 30, 2024

Extend monkeybread neighbourhood to include n>1 cells

enhancement ✨New feature or requestNew feature or request

featurePR introduces a new featurePR introduces a new feature

graph 🕸️

squidpy2.0Everything releated to a Squidpy 2.0 releaseEverything releated to a Squidpy 2.0 release

Status: Open.

#905 In scverse/squidpy;

· timtreis opened on Oct 29, 2024

Add SpaGFT-like method for identification of SVGs

enhancement ✨New feature or requestNew feature or request

graph 🕸️

squidpy2.0Everything releated to a Squidpy 2.0 releaseEverything releated to a Squidpy 2.0 release

Status: Open.

#901 In scverse/squidpy;

· timtreis opened on Oct 15, 2024

How to draw co_occurrence plot with specific distance in x-axis?

Status: Open.

#899 In scverse/squidpy;

· Zhaowado opened on Oct 11, 2024

CosMx FOVs being skipped

Status: Open.

#894 In scverse/squidpy;

· jamesboot opened on Oct 2, 2024

Mapping of Xenium 5k data

I/O 💿

Status: Open.

#889 In scverse/squidpy;

· shanggutianzhen opened on Sep 18, 2024

Edge correction in squidpy.gr.ripley?

enhancement ✨New feature or requestNew feature or request

graph 🕸️

Status: Open.

#886 In scverse/squidpy;

· zsfrbkv opened on Sep 13, 2024

[doc improvment] inconsistent usage of img_key and img_res_key in code base

docImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#884 In scverse/squidpy;

· TTTPOB opened on Sep 3, 2024

Add SpatialLeiden as clustering method

enhancement ✨New feature or requestNew feature or request

graph 🕸️

Status: Open.

#879 In scverse/squidpy;

· timtreis opened on Aug 26, 2024

Infer parameters in sq.gr.spatial_neighbors when only one choice

enhancement ✨New feature or requestNew feature or request

graph 🕸️

sdata compat 🌌

Status: Open.

#876 In scverse/squidpy;

· timtreis opened on Aug 21, 2024