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Issues: rust-bio/rust-bio

Roadmap / Todos
#3 opened Feb 22, 2015 by johanneskoester
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rust-bio docathon 2020
#276 opened Jun 29, 2020 by tedil
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68 Open 130 Closed
68 Open 130 Closed
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Issues list

Consider publishing intervaltree/datastructures implementation as a standalone crate
#607 opened Oct 8, 2024 by derekleverenz
1
Index out of bounds in FMIndex::backwards_search
#606 opened Oct 3, 2024 by RagnarGrootKoerkamp
❔ [Question]: Has anyone started wrapping a Python package around rust-bio?
#592 opened Jun 30, 2024 by galenseilis
Integration of PDBTBX
#589 opened May 15, 2024 by OWissett
Question : how to get all the elements of Dbxref
#574 opened Feb 14, 2024 by simonpenel
POA method to get aligned sequences with gaps back?
#571 opened Feb 7, 2024 by davidlougheed
3
POA end gap/semi-global alignment
#568 opened Jan 2, 2024 by ctsa
7
Update statrs version to 0.16 to avoid future rust incompatibility
#559 opened Oct 24, 2023 by robinpaul85
RankSelect uses double the space needed
#548 opened Aug 12, 2023 by jorgehermo9
Cargo.toml instructions should suggest bio = "1" instead of bio = "*"
#546 opened Jul 24, 2023 by ChaiTRex
Select operation on RankSelect structure may be broken
#545 opened Jul 19, 2023 by jorgehermo9
Coverage CI test failing due to compiler bug (being addressed upstream)
#543 opened Jul 11, 2023 by dlaehnemann
1
[Feature Request] Add Transcription & Translation capabilities
#526 opened Jun 12, 2023 by Cardosaum
1
New paper
#519 opened May 1, 2023 by smortezah
keywords and categories are missing on cargo.toml enhancement
#518 opened Mar 26, 2023 by anilbey
Wrap sequence in output file
#508 opened Dec 9, 2022 by alvanuffelen
1
DOC: Not documented that FM index / suffix array / BWT require terminal sentinel character
#495 opened Aug 1, 2022 by corneliusroemer
1
DOC: public fn alignment::sparse::expand_kmer_matches not documented
#494 opened Jul 29, 2022 by corneliusroemer
1
FEAT: Support unicode strings, not just byte sequences
#492 opened Jul 15, 2022 by NickCrews
FASTA/Q sequence record check insufficient
#472 opened Dec 25, 2021 by ebioman
1
Tracking issue for phylogeny reconstruction algorithms
#467 opened Nov 25, 2021 by RagnarGrootKoerkamp
Expanding the bed record to bed12
#462 opened Nov 16, 2021 by mrvollger
Why so many stale branches ?
#452 opened Sep 26, 2021 by stormasm
2
Canonical way to convert to sam format
#441 opened Jul 11, 2021 by lskatz
Canonical way to convert between formats?
#440 opened Jul 11, 2021 by lskatz
4
ProTip! What’s not been updated in a month: updated:<2024-11-02.