Repositories list

• kb

  Public
  Development repo for the VARS KB web app

  JavaScript

  •0•0•3•0•Updated May 3, 2025May 3, 2025

• dash5

  Public
  Web based UI and client applications for MBARI.

  TypeScript

  •2•1•47•0•Updated May 2, 2025May 2, 2025

• auv-python

  Public
  Python code for processing MBARI AUV instrument data

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •2•0•5•1•Updated May 1, 2025May 1, 2025

• vampire-squid-java-sdk

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Apr 30, 2025Apr 30, 2025

• oni-java-sdk

  Public
  Java

  •0•0•0•0•Updated Apr 30, 2025Apr 30, 2025

• annosaurus-java-sdk

  Public
  A Java client SDK for the Annosaurus microservice.

  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Apr 30, 2025Apr 30, 2025

• inertial-sense-sdk

  Public
  The InertialSenseSDK contains code to quickly and easily integrate with Inertial Sense systems.

  C++

  •

  MIT License

  •33•0•0•0•Updated Apr 30, 2025Apr 30, 2025

• vars-gridview

  Public
  VARS GridView is a tool for reviewing and correcting VARS localizations in bulk.

  Python

  •

  MIT License

  •0•2•19•0•Updated Apr 30, 2025Apr 30, 2025

• oni

  Public
  Organism Naming Infrastructure

  TSQL

  •0•0•5•0•Updated Apr 29, 2025Apr 29, 2025

• aipipeline

  Public
  Library for running detection, clustering or classification ai pipelines using ApacheBeam

  image-classificationapache-beamobject-detection+ 3object-trackingvideo-processing-pipelineimage-processing-pipeline

  Jupyter Notebook

  •

  Apache License 2.0

  •0•2•0•0•Updated Apr 26, 2025Apr 26, 2025

• aidata

  Public
  Extract, transform, and load/download media and annotations for detection, clustering or classification workflows. https://docs.mbari.org/internal/ai/data

  machine-learningdatabaseai+ 1etl

  Python

  •0•1•2•0•Updated Apr 25, 2025Apr 25, 2025

• fastapi-tator

  Public
  RESTful API for bulk operations on a Tator annotation database on clustered, labeled, localization data. It uses the Python web framework FastAPI.

  annotation-processingfastapitator

  Python

  •

  Apache License 2.0

  •0•1•0•0•Updated Apr 25, 2025Apr 25, 2025

• sdcat

  Public
  Sliced Detection and Clustering Analysis Toolkit

  uavdroneclustering+ 9object-detectionplanktonsahisaliency-detectiondeepseayolov5hdbscan-clustering-algorithm+ 2

  Python

  •0•5•6•0•Updated Apr 25, 2025Apr 25, 2025

• m3-quickstart

  Public
  A simple and quick method to run MBARI's Video Annotation and References System

  Python

  •1•2•9•0•Updated Apr 18, 2025Apr 18, 2025

• auvstatus

  Public
  LRAUV status widgets

  Python

  •1•3•32•0•Updated Apr 16, 2025Apr 16, 2025

• optim-data-viz

  Public
  Python

  •0•0•0•0•Updated Apr 11, 2025Apr 11, 2025

• lcm-syntax-highlighting

  Public
  VS Code extension that provides syntax highlighting for LCM Type Specification files (*.lcm)

  MIT License

  •0•1•0•0•Updated Apr 11, 2025Apr 11, 2025

• tator

  Public
  Video analytics web platform revised for MBARI use

  image-annotationvideo-annotation

  JavaScript

  •

  GNU Affero General Public License v3.0

  •33•0•0•0•Updated Apr 11, 2025Apr 11, 2025

• pbp

  Public
  Process ocean audio data archives to daily analysis products of hybrid millidecade spectra using PyPAM.

  dockercloudnotebook+ 4soundscapeaudio-processinghybrid-millidecade-bandspypam

  Python

  •

  Apache License 2.0

  •6•14•16•1•Updated Apr 11, 2025Apr 11, 2025

• lcm-websocket-server

  Public
  WebSocket server for republishing LCM messages.

  middlewarewebsocketlcm

  Python

  •0•3•5•1•Updated Apr 11, 2025Apr 11, 2025

• tator-js

  Public
  JavaScript client for Tator

  JavaScript

  •2•0•0•0•Updated Apr 11, 2025Apr 11, 2025

• python-visca

  Public
  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Apr 9, 2025Apr 9, 2025

• odss2dash

  Public
  This service pushes Tracking DB platform positions to configured TethysDash instances, which in turn push them to clients via websockets

  Rust

  •0•1•0•0•Updated Apr 8, 2025Apr 8, 2025

• ecoz2rs

  Public
  ECOZ2 in Rust

  hmmsupervised-learningk-means+ 5unsupervised-learninghidden-markov-modelsvector-quantizationlinear-predictive-codingsignal-recognition

  Rust

  •0•3•0•0•Updated Apr 4, 2025Apr 4, 2025

• gz_lrauv

  Public
  Packages for simulating the Tethys-class Long-Range AUV (LRAUV) from the Monterey Bay Aquarium Research Institute (MBARI).

  C++

  •

  Apache License 2.0

  •17•0•0•0•Updated Apr 4, 2025Apr 4, 2025

• vars-annotation

  Public
  Video Annotation Application for MBARI's Media Management (M3) software stack

  Java

  •

  Apache License 2.0

  •6•16•18•0•Updated Apr 2, 2025Apr 2, 2025

• vars

  Public
  Documentation for running MBARI's Video Annotation and Reference System

  0•0•0•0•Updated Mar 27, 2025Mar 27, 2025

• pacific-sound-notebooks

  Public
  Juptyer notebook tutorials on using the data in the AWS pacific-sound registry for ocean soundscape research, education, and the arts

  awsopen-dataopen-access+ 10open-scienceacousticsopen-datasetsmarine-datahumpbackbluewhalehumpback-whale+ 3

  GNU General Public License v3.0

  •6•24•1•0•Updated Mar 11, 2025Mar 11, 2025

• pythia

  Public
  ML service for images

  HTML

  •

  Apache License 2.0

  •0•0•2•0•Updated Mar 11, 2025Mar 11, 2025

• mxm

  Public
  Mission Execution Mediation Service (WIP)

  Java

  •

  Apache License 2.0

  •0•0•1•0•Updated Mar 10, 2025Mar 10, 2025