PASSION Lab

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14 repositories

OpenEquivariance
Public
OpenEquivariance: a fast, open-source GPU JIT kernel generator for the Clebsch-Gordon Tensor Product.
cuda geometric-deep-learning sparse-tensors graph-neural-networks equivariance
Python
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BSD 3-Clause "New" or "Revised" License
•1•36•2•0•Updated Feb 24, 2025Feb 24, 2025
CombBLAS
Public
The Combinatorial BLAS (CombBLAS) is an extensible distributed-memory parallel graph library offering a small but powerful set of linear algebra primitives specifically targeting graph analytics.
C++
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Other
•24•70•11•2•Updated Feb 17, 2025Feb 17, 2025
CAGNET
Public
Python
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Other
•16•43•1•0•Updated Jan 26, 2025Jan 26, 2025
PASTIS
Public
Distributed Protein Sequence Aligner
C++
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Other
•0•7•6•0•Updated Oct 3, 2024Oct 3, 2024
ELBA
Public
Parallel String Graph Construction, Transitive Reduction, and Contig Generation for De Novo Genome Assembly
genome hpc overlapping genome-assembly hpc-applications kmer-counting longread spgemm longread-aligner combblas
C++
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Other
•10•15•0•0•Updated Jun 11, 2024Jun 11, 2024
terrace
Public
Terrace: A Hierarchical Graph Container for Skewed Dynamic Graphs
C++
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BSD 3-Clause "New" or "Revised" License
•7•24•2•0•Updated Jun 18, 2023Jun 18, 2023
CSB
Public
C++
•1•2•0•1•Updated Aug 13, 2022Aug 13, 2022
HUNTRESS
Public
Approximate reconstruction algorithm for matrices having false positives and false negatives
Python
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Other
•1•4•0•0•Updated Jul 12, 2022Jul 12, 2022
distributed_sddmm
Public
Distributed SDDMM Kernel
C++
•1•10•0•0•Updated Jul 8, 2022Jul 8, 2022
MaskedSpGEMM
Public
C++
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Apache License 2.0
•3•9•1•0•Updated Jul 4, 2022Jul 4, 2022
BELLA
Public
BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
matrix-multiplication long-read spgemm genome-alignment pacbio-aligner longread-aligner read-aligners overlapper
C++
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Other
•8•48•3•0•Updated May 16, 2022May 16, 2022
gpu-counting-filter
Public
A General-Purpose Counting Filter: Counting Quotient Filter
Cuda
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BSD 3-Clause "New" or "Revised" License
•36•2•0•0•Updated Apr 9, 2022Apr 9, 2022
GraphLearning
Public
2•0•0•0•Updated Mar 31, 2022Mar 31, 2022
DEDUKT
Public
C++
•2•5•1•0•Updated Feb 26, 2021Feb 26, 2021