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HydroData: Earth Systems Data in R

travis DOI

HydroData is designed to help (1) find, (2) get, (3) visualize, and (4) format disparate earth systems data through a core language (R); a common geospatial reference (ESPG:4629) ; and unifying vocabulary built around querying data by an area of interest (AOI). The package supports access to 20+ National/Global data sources.

All functions are designed to work with the AOI package and magrittr pipe operation %>% allowing successive HydroData calls to be directly chained to an area of interest:

Number Dataset Description Format
1 GHCN Global Historical Climate Network Vector point
2 International Airports OpenFlights Geo-database Vector point
3 NID National Inventory of Dams (USACE) Vector point
4 NWIS National Water Information System Site Index Vector point
5 Snotel The NRCS Snow Measurement Stations Vector point
6 GagesII Geospatial Attributes of Gages for Evaluating Streamflow Vector point, line
7 NLDI The Network Linked Data Index Vector point, line, polygon
8 TIGER 2017 US Census Bureau Road Network Vector line
9 NHDPlus National Hydrography Dataset Waterbodies, River Network, Catchments Vector line, polygon
10 EPA Basins Environmental Protection Agency NWIS drainage basins Vector polygon
11 SSURGO National Cooperative Soil Survey Geospatial Soil Data Base Vector polygon
12 WBD The Watershed Boundary Dataset (all HUC levels) Vector polygon
13 CDL USDA Crop Data Layers (2008 - 2017) Raster
14 NED National Elevation Dataset (10 and 30 meter resolutions) Raster
15 NLCD National Land Cover Dataset (01,06,11) (Impervious, canopy, Land cover) Raster
myData = getAOI(clip = list("UCSB", 10, 10)) %>% 
findNHD() %>% 
findWaterbodies %>% 
findNWIS %>% 
findNED()
str(myData,max.level = 2)

List of 5
 $ AOI        :Formal class 'SpatialPolygons' [package "sp"] with 4 slots
 $ nhd        :Formal class 'SpatialLinesDataFrame' [package "sp"] with 4 slots
 $ waterbodies:Formal class 'SpatialPolygonsDataFrame' [package "sp"] with 5 slots
 $ nwis       :Formal class 'SpatialPointsDataFrame' [package "sp"] with 5 slots
 $ NED        :Formal class 'RasterLayer' [package "raster"] with 12 slots
 - attr(*, "class")= chr "HydroData"

For now, most internal HydroData operations are based of the 'simple feature (sf)' library however objects are all returned as Spatial* sp objects. As the community around simple features grows the default output of 'HydroData' might change. Until then users can use the to_sf function to convert a HydroData object to simple features where appropriate.

HydroData offer in-package tools for generating interactive visualizations of HydroData Spatial* objects

myData.sf = myData %>% to_sf
str(myData.sf,max.level = 1)

List of 5
 $ NED        :Formal class 'RasterLayer' [package "raster"] with 12 slots
 $ AOI        :Classes ‘sf’ and 'data.frame':	1 obs. of  1 variable:
  ..- attr(*, "sf_column")= chr "geometry"
  ..- attr(*, "agr")= Factor w/ 3 levels "constant","aggregate",..: 
  .. ..- attr(*, "names")= chr(0) 
 $ nhd        :Classes ‘sf’ and 'data.frame':	100 obs. of  92 variables:
  ..- attr(*, "sf_column")= chr "geometry"
  ..- attr(*, "agr")= Factor w/ 3 levels "constant","aggregate",..: NA NA NA NA NA NA NA NA NA NA ...
  .. ..- attr(*, "names")= chr [1:91] "id" "ogc_fid" "comid" "fdate" ...
 $ waterbodies:Classes ‘sf’ and 'data.frame':	11 obs. of  24 variables:
  ..- attr(*, "sf_column")= chr "geometry"
  ..- attr(*, "agr")= Factor w/ 3 levels "constant","aggregate",..: NA NA NA NA NA NA NA NA NA NA ...
  .. ..- attr(*, "names")= chr [1:23] "id" "objectid" "comid" "fdate" ...
 $ nwis       :Classes ‘sf’ and 'data.frame':	3 obs. of  8 variables:
  ..- attr(*, "sf_column")= chr "geometry"
  ..- attr(*, "agr")= Factor w/ 3 levels "constant","aggregate",..: NA NA NA NA NA NA NA
  .. ..- attr(*, "names")= chr [1:7] "OBJECTID" "feature_id" "site_no" "site_name" ...
  

HydroData offer in-package tools for generating interactive visualizations of HydroData Spatial* objects

 myData %>% explore()


To download and get started with HydroData, install from GitHub using the devtools packages:

library(devtools)
install_github("mikejohnson51/HydroData")

Support:

HydroData is written by Mike Johnson, a graduate Student at the University of California, Santa Barbara in Keith C. Clarke's Lab, 2018 and is funded through the NOAA National Water Center (NWC) via the UCAR COMET Program (2017/18).