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@jordanlab

Jordan Lab

The Jordan Lab @ Georgia Tech | Bioinformatics and Computational Genomics

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  1. stringMLST Public

    Fast k-mer based tool for multi locus sequence typing (MLST)

    Python 43 7

  2. STing Public

    Ultrafast sequence typing and gene detection from NGS raw reads

    C++ 20 2

Repositories

Showing 10 of 13 repositories
  • stringMLST_datasets Public

    stringMLST datasets

    5 MIT 0 1 0 Updated Mar 18, 2023
  • tagore Public

    The script presents a simple way to visualize features on human chromosome ideograms

    Python 41 GPL-3.0 10 3 0 Updated Dec 23, 2022
  • STing_datasets Public

    MLST and other databases for STing

    Python 1 MIT 0 0 0 Updated Sep 17, 2022
  • pfgeBLAST Public

    PFGE from raw reads

    Python 0 0 0 0 Updated Jul 18, 2021
  • ChocoGen-TraitMap Public
    HTML 0 1 0 6 Updated May 11, 2021
  • STing Public

    Ultrafast sequence typing and gene detection from NGS raw reads

    C++ 20 2 4 0 Updated Apr 15, 2021
  • stringMLST Public

    Fast k-mer based tool for multi locus sequence typing (MLST)

    Python 43 7 4 0 Updated Sep 3, 2020
  • ChocoGen3-Chandeetal-2020 Public

    Scripts for Chande et al. 2020. The phenotypic and functional consequences of genomic divergence between admixed Latin American populations: Antioquia and Chocó, Colombia

    R 0 BSD-3-Clause 0 0 0 Updated Jan 14, 2020
  • pChunk Public

    Rapid, accurate annotations of Plasmids from Illumina NGS reads

    R 1 0 0 0 Updated Sep 30, 2019
  • nifH_extract Public Forked from cchu70/nifHupdate_extract

    nifH_extract is a pipeline that retrieves a preliminary database of sequences from using an existing database of nifH genes.

    Python 0 1 4 0 Updated Aug 29, 2019
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