Journal formatting changes #25
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jjc2718
commented
Oct 21, 2024
| The scripts used to download and preprocess the datasets for this study are available at <https://github.com/greenelab/pancancer-evaluation/tree/master/00_process_data>. | ||
| Scripts for TCGA <-> CCLE comparisons (Figures 2 and 3) and neural network experiments (Figure 5) are available in the <https://github.com/greenelab/pancancer-evaluation/tree/master/08_cell_line_prediction> directory. | ||
| Scripts for TCGA cancer type comparisons (Figure 4) are available in the <https://github.com/greenelab/pancancer-evaluation/tree/master/02_cancer_type_classification> directory. | ||
| All scripts are available under the open-source BSD 3-clause license. | ||
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| This manuscript was written using Manubot [@doi:10.1371/journal.pcbi.1007128] and is available on GitHub at <https://github.com/greenelab/generalization-manuscript> under the CC0-1.0 license. | ||
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| ## Acknowledgments | ||
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@cgreene Could you add funding/grant number information in this section as a proposed change, when you get a chance?
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Got it - want me to merge & then submit?
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Sure, if you don't mind! They also want us to submit the figures separately, as PDFs - I'll email them to you.
cgreene
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Oct 31, 2024
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[ci skip] This build is based on 99a154a. This commit was created by the following CI build and job: https://github.com/greenelab/generalization-manuscript/commit/99a154a1897a117561fabea8de1f9479dcd3c5de/checks https://github.com/greenelab/generalization-manuscript/actions/runs/11668301435
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[ci skip] This build is based on 99a154a. This commit was created by the following CI build and job: https://github.com/greenelab/generalization-manuscript/commit/99a154a1897a117561fabea8de1f9479dcd3c5de/checks https://github.com/greenelab/generalization-manuscript/actions/runs/11668301435
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[ci skip] This build is based on 99a154a. This commit was created by the following CI build and job: https://github.com/greenelab/generalization-manuscript/commit/99a154a1897a117561fabea8de1f9479dcd3c5de/checks https://github.com/greenelab/generalization-manuscript/actions/runs/11668913741
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[ci skip] This build is based on 99a154a. This commit was created by the following CI build and job: https://github.com/greenelab/generalization-manuscript/commit/99a154a1897a117561fabea8de1f9479dcd3c5de/checks https://github.com/greenelab/generalization-manuscript/actions/runs/11668913741
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