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@Teichlab @MarioniLab @scverse

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  1. MarioniLab/miloR MarioniLab/miloR Public

    R package implementation of Milo for testing for differential abundance in KNN graphs

    R 342 22

  2. milopy milopy Public

    Python implementation of Milo for differential abundance testing on KNN graph

    Jupyter Notebook 60 7

  3. Teichlab/Pan_fetal_immune Teichlab/Pan_fetal_immune Public

    Collection of scripts for analysis of pan fetal immune atlas

    Jupyter Notebook 25 6

  4. MarioniLab/oor_benchmark MarioniLab/oor_benchmark Public

    A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data

    Python 13 2

  5. momicsTools momicsTools Public

    A collection of resources and knowledge for analysis of scATAC+scRNA multi omics data

    10

  6. MarioniLab/oor_design_reproducibility MarioniLab/oor_design_reproducibility Public

    Jupyter Notebook 14 1