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Thank you for you provided such a convenient platform for other science researchers to carry out the analysis of antibiotic resistance genes in different samples, but I have some problems about the stage two pipeline. Although I uploaded the same extracted.fa and meta-data.txt file generated in stage one into Galaxy every time, while the final outputs (e.g., normalized against 16S copy numbers. txt files) were always inconsistent. Is there something wrong with my inputs? Can you help me find out the cause of the problem? I'm looking forward to receiving your reply.
Some parameters were selected in ARGs-OAP version 2.2
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