Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

pip install pyccl is broken #1194

Open
arthurmloureiro opened this issue Aug 1, 2024 · 9 comments
Open

pip install pyccl is broken #1194

arthurmloureiro opened this issue Aug 1, 2024 · 9 comments
Labels
BUG Installation

Comments

@arthurmloureiro
Copy link

Hi CCL Devs!

Unsure this is a known issue but the python -m pip install pyccl seems to be broken.
I understand that conda install pyccl is a working alternative but this forces other packages dependent on ccl to also drop PyPI support.

On MacOS we still have the issue reported here: #404 where CMake cannot be found when using pip.

On linux machines, the error is longer but still fails:

      [ 87%] Building C object CMakeFiles/objlib.dir/src/ccl_fftlog.c.o
      make[3]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      [ 87%] Built target objlib
      make[3]: Entering directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make[3]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make[3]: Entering directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      [ 90%] Linking C shared library libccl.so
      make[3]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      [ 90%] Built target ccl
      make[3]: Entering directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make[3]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make[3]: Entering directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      [ 92%] Linking C static library libccl_static.a
      make[3]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      [ 92%] Built target ccl_static
      make[3]: Entering directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      Scanning dependencies of target ccllib_swig_compilation
      make[3]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make[3]: Entering directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      [ 95%] Swig compile ccl.i for python
      /tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/pyccl/ccl.i:10: Error: Syntax error in input(1).
      make[3]: *** [pyccl/CMakeFiles/_ccllib.dir/cclPYTHON.stamp] Error 1
      make[3]: *** Deleting file `pyccl/CMakeFiles/_ccllib.dir/cclPYTHON.stamp'
      make[3]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make[2]: *** [pyccl/CMakeFiles/ccllib_swig_compilation.dir/all] Error 2
      make[2]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make[1]: *** [pyccl/CMakeFiles/_ccllib.dir/rule] Error 2
      make[1]: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      make: *** [_ccllib] Error 2
      make: Leaving directory `/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/build'
      Traceback (most recent call last):
        File "<string>", line 2, in <module>
        File "<pip-setuptools-caller>", line 34, in <module>
        File "/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/setup.py", line 82, in <module>
          setup(
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/__init__.py", line 103, in setup
          return distutils.core.setup(**attrs)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/core.py", line 185, in setup
          return run_commands(dist)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/core.py", line 201, in run_commands
          dist.run_commands()
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
          self.run_command(cmd)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/dist.py", line 963, in run_command
          super().run_command(command)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/wheel/bdist_wheel.py", line 368, in run
          self.run_command("build")
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/cmd.py", line 318, in run_command
          self.distribution.run_command(command)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/dist.py", line 963, in run_command
          super().run_command(command)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/command/build.py", line 131, in run
          self.run_command(cmd_name)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/cmd.py", line 318, in run_command
          self.distribution.run_command(command)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/dist.py", line 963, in run_command
          super().run_command(command)
        File "/cfs/home/arlo0272/.local-co/envs/test/lib/python3.10/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/setup.py", line 56, in run
          _compile_ccl(debug=self.distribution.debug)
        File "/tmp/pip-install-tkaswh3c/pyccl_6c4e14ca14ee4721bef09fdea9e99106/setup.py", line 27, in _compile_ccl
          raise Exception("Could not build CCL")
      Exception: Could not build CCL
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for pyccl
  Running setup.py clean for pyccl
Failed to build pyccl
ERROR: Could not build wheels for pyccl, which is required to install pyproject.toml-based projects

This is in a fresh new test environment.
@tilmantroester
Copy link
Contributor

Since the error seems to come during the swig compilation, maybe it's an issue with the swig version?

Long-term we should just get rid of the C stuff or at least use something modern like pybind11.

@arthurmloureiro
Copy link
Author

I will check that and report here! On the MacOS, I have updated both swig and Cmake and still got it breaking

@tilmantroester
Copy link
Contributor

Maybe try downgrading swig and cmake. I know that at least for cmake some new versions are not fully backwards compatible.

@hsinfan1996
Copy link
Contributor

hsinfan1996 commented Aug 2, 2024 •
edited
Loading

Try removing the build folder first and install pyccl again with python -m pip install pyccl.

@halecatherine
Copy link

I also had pip issues installing CCL. Mine complained that CMake is not installed despite CMake having been installed via brew (I also tried the pip one) and the "cmake" command being there in the command line. I think I managed to get it installed using GitHub and installing manually with setup.py

@abhavishwakarma123
Copy link

I also had pip issues installing CCL. Mine complained that CMake is not installed despite CMake having been installed via brew (I also tried the pip one) and the "cmake" command being there in the command line. I think I managed to get it installed using GitHub and installing manually with setup.py

Can you elaborate on how you installed it manually with setup.py? I am facing the same issue.

ggalloni added a commit to ggalloni/SOLikeT that referenced this issue Sep 24, 2024
@ggalloni
test conda install for pyccl, see [issue](LSSTDESC/CCL#1194)
a36a5dd
@ggalloni ggalloni mentioned this issue Sep 24, 2024
Open
@itrharrison
Copy link

In SOLikeT we have started having problems building pyccl too.

This appears only on Python 3.8 AND linux (not on other python version or on python 3.8 in macos).

From looking at where the error first appears:

        -- Found PythonInterp: /usr/share/miniconda/envs/soliket-tests/bin/python3.8 (found suitable version "3.8.20", minimum required is "3.8.20")
        -- Found PythonLibs: /usr/share/miniconda/envs/soliket-tests/lib/libpython3.8.so
        CMake Warning (dev) at cmake/Modules/FindNumPy.cmake:45 (find_package):
          Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
          are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
          the cmake_policy command to set the policy and suppress this warning.
        
        Call Stack (most recent call first):
          pyccl/CMakeLists.txt:9 (find_package)
        This warning is for project developers.  Use -Wno-dev to suppress it.
        
        -- Found PythonInterp: /usr/share/miniconda/envs/soliket-tests/bin/python3.8 (found version "3.8.20")
        CMake Error at cmake/Modules/FindNumPy.cmake:70 (list):
          list GET given empty list
        Call Stack (most recent call first):
          pyccl/CMakeLists.txt:9 (find_package)

and the policy mentioned in the warning:

cmake --help-policy CMP0148
CMP0148
-------

.. versionadded:: 3.27

The ``FindPythonInterp`` and ``FindPythonLibs`` modules are removed.

These modules have been deprecated since CMake 3.12.
CMake 3.27 and above prefer to not provide the modules.
This policy provides compatibility for projects that have not been
ported away from them.

Projects using the ``FindPythonInterp`` and/or ``FindPythonLibs``
modules should be updated to use one of their replacements:

* ``FindPython3``
* ``FindPython2``
* ``FindPython``

The ``OLD`` behavior of this policy is for ``find_package(PythonInterp)``
and ``find_package(PythonLibs)`` to load the deprecated modules.  The ``NEW``
behavior is for uses of the modules to fail as if they do not exist.

This policy was introduced in CMake version 3.27.
It may be set by ``cmake_policy()`` or ``cmake_minimum_required()``.
If it is not set, CMake warns, and uses ``OLD`` behavior.

.. note::
  The ``OLD`` behavior of a policy is
  ``deprecated by definition``
  and may be removed in a future version of CMake.

It seems as though updating this file might help?
https://github.com/LSSTDESC/CCL/blob/a14a71727441aacd27b11eab20200e7b15d724f3/cmake/Modules/FindPythonLibsNew.cmake

I have never used cmake though so it may have nothing to do with it!

@arthurmloureiro arthurmloureiro mentioned this issue Oct 9, 2024
Closed
@itrharrison
Copy link

Okay!

I was able to fix this by making sure setuptools and wheel were explicitly installed in my env before I did pip install pyccl.

I'm not sure I understand why your

[build-system]
requires = ["setuptools>=64", "setuptools_scm>=8", "cmake", "swig"]

in the pyproject.toml wasn't already enforcing this though?

@itrharrison
Copy link

Sorry, to be more specific, I was able to get it installed in an env which looks like this:

anyio                     4.4.0              pyhd8ed1ab_0    conda-forge
appnope                   0.1.4              pyhd8ed1ab_0    conda-forge
archspec                  0.2.3              pyhd8ed1ab_0    conda-forge
argon2-cffi               23.1.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py310h493c2e1_5    conda-forge
arrow                     1.3.0              pyhd8ed1ab_0    conda-forge
astropy                   6.1.3           py310hae04be4_1    conda-forge
astropy-iers-data         0.2024.9.16.0.32.21    pyhd8ed1ab_0    conda-forge
asttokens                 2.4.1              pyhd8ed1ab_0    conda-forge
async-lru                 2.0.4              pyhd8ed1ab_0    conda-forge
attrs                     24.2.0             pyh71513ae_0    conda-forge
babel                     2.14.0             pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.12.3             pyha770c72_0    conda-forge
bleach                    6.1.0              pyhd8ed1ab_0    conda-forge
boltons                   24.0.0             pyhd8ed1ab_0    conda-forge
brotli                    1.1.0                hb547adb_1    conda-forge
brotli-bin                1.1.0                hb547adb_1    conda-forge
brotli-python             1.1.0           py310h1253130_1    conda-forge
bzip2                     1.0.8                h93a5062_5    conda-forge
c-ares                    1.28.1               h93a5062_0    conda-forge
ca-certificates           2024.8.30            hf0a4a13_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cachetools                5.5.0              pyhd8ed1ab_0    conda-forge
certifi                   2024.8.30          pyhd8ed1ab_0    conda-forge
cffi                      1.16.0          py310hdcd7c05_0    conda-forge
chardet                   5.2.0           py310hbe9552e_2    conda-forge
charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
comm                      0.2.2              pyhd8ed1ab_0    conda-forge
conda                     24.9.1          py310hbe9552e_0    conda-forge
conda-libmamba-solver     24.1.0             pyhd8ed1ab_0    conda-forge
conda-package-handling    2.2.0              pyh38be061_0    conda-forge
conda-package-streaming   0.9.0              pyhd8ed1ab_0    conda-forge
contourpy                 1.3.0           py310h7306fd8_1    conda-forge
cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
debugpy                   1.8.5           py310hb4ad77e_1    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
distlib                   0.3.8              pyhd8ed1ab_0    conda-forge
distro                    1.9.0              pyhd8ed1ab_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
exceptiongroup            1.2.2              pyhd8ed1ab_0    conda-forge
executing                 2.1.0              pyhd8ed1ab_0    conda-forge
filelock                  3.16.0             pyhd8ed1ab_0    conda-forge
fmt                       10.2.1               h2ffa867_0    conda-forge
fonttools                 4.53.1          py310h493c2e1_1    conda-forge
fqdn                      1.5.1              pyhd8ed1ab_0    conda-forge
freetype                  2.12.1               hadb7bae_2    conda-forge
frozendict                2.4.4           py310ha6dd24b_0    conda-forge
gettext                   0.22.5               h8414b35_3    conda-forge
gettext-tools             0.22.5               h8414b35_3    conda-forge
gh                        2.55.0               h163aea0_0    conda-forge
h11                       0.14.0             pyhd8ed1ab_0    conda-forge
h2                        4.1.0              pyhd8ed1ab_0    conda-forge
hpack                     4.0.0              pyh9f0ad1d_0    conda-forge
httpcore                  1.0.5              pyhd8ed1ab_0    conda-forge
httpx                     0.27.2             pyhd8ed1ab_0    conda-forge
hyperframe                6.0.1              pyhd8ed1ab_0    conda-forge
icu                       73.2                 hc8870d7_0    conda-forge
idna                      3.6                pyhd8ed1ab_0    conda-forge
importlib-metadata        8.5.0              pyha770c72_0    conda-forge
importlib_metadata        8.5.0                hd8ed1ab_0    conda-forge
importlib_resources       6.4.5              pyhd8ed1ab_0    conda-forge
ipykernel                 6.29.5             pyh57ce528_0    conda-forge
ipython                   8.27.0             pyh707e725_0    conda-forge
ipywidgets                8.1.5              pyhd8ed1ab_0    conda-forge
isoduration               20.11.0            pyhd8ed1ab_0    conda-forge
jedi                      0.19.1             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.4              pyhd8ed1ab_0    conda-forge
json5                     0.9.25             pyhd8ed1ab_0    conda-forge
jsonpatch                 1.33               pyhd8ed1ab_0    conda-forge
jsonpointer               2.4             py310hbe9552e_3    conda-forge
jsonschema                4.23.0             pyhd8ed1ab_0    conda-forge
jsonschema-specifications 2023.12.1          pyhd8ed1ab_0    conda-forge
jsonschema-with-format-nongpl 4.23.0               hd8ed1ab_0    conda-forge
jupyter                   1.1.1              pyhd8ed1ab_0    conda-forge
jupyter-lsp               2.2.5              pyhd8ed1ab_0    conda-forge
jupyter_client            8.6.2              pyhd8ed1ab_0    conda-forge
jupyter_console           6.6.3              pyhd8ed1ab_0    conda-forge
jupyter_core              5.7.2           py310hbe9552e_0    conda-forge
jupyter_events            0.10.0             pyhd8ed1ab_0    conda-forge
jupyter_server            2.14.2             pyhd8ed1ab_0    conda-forge
jupyter_server_terminals  0.5.3              pyhd8ed1ab_0    conda-forge
jupyterlab                4.2.5              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.3.0              pyhd8ed1ab_1    conda-forge
jupyterlab_server         2.27.3             pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        3.0.13             pyhd8ed1ab_0    conda-forge
kiwisolver                1.4.7           py310h7306fd8_0    conda-forge
krb5                      1.21.2               h92f50d5_0    conda-forge
lcms2                     2.16                 ha0e7c42_0    conda-forge
lerc                      4.0.0                h9a09cb3_0    conda-forge
libarchive                3.7.2                hcacb583_1    conda-forge
libasprintf               0.22.5               h8414b35_3    conda-forge
libasprintf-devel         0.22.5               h8414b35_3    conda-forge
libblas                   3.9.0           23_osxarm64_openblas    conda-forge
libbrotlicommon           1.1.0                hb547adb_1    conda-forge
libbrotlidec              1.1.0                hb547adb_1    conda-forge
libbrotlienc              1.1.0                hb547adb_1    conda-forge
libcblas                  3.9.0           23_osxarm64_openblas    conda-forge
libcurl                   8.7.1                h2d989ff_0    conda-forge
libcxx                    18.1.8               h3ed4263_7    conda-forge
libdeflate                1.20                 h93a5062_0    conda-forge
libedit                   3.1.20191231         hc8eb9b7_2    conda-forge
libev                     4.33                 h93a5062_2    conda-forge
libffi                    3.4.2                h3422bc3_5    conda-forge
libgettextpo              0.22.5               h8414b35_3    conda-forge
libgettextpo-devel        0.22.5               h8414b35_3    conda-forge
libgfortran               5.0.0           13_2_0_hd922786_3    conda-forge
libgfortran5              13.2.0               hf226fd6_3    conda-forge
libiconv                  1.17                 h0d3ecfb_2    conda-forge
libidn2                   2.3.7                h93a5062_0    conda-forge
libintl                   0.22.5               h8414b35_3    conda-forge
libintl-devel             0.22.5               h8414b35_3    conda-forge
libjpeg-turbo             3.0.0                hb547adb_1    conda-forge
liblapack                 3.9.0           23_osxarm64_openblas    conda-forge
libmamba                  1.5.8                h90c426b_0    conda-forge
libmambapy                1.5.8           py310h5e0a2f6_0    conda-forge
libnghttp2                1.58.0               ha4dd798_1    conda-forge
libopenblas               0.3.27          openmp_h517c56d_1    conda-forge
libpng                    1.6.43               h091b4b1_0    conda-forge
libsodium                 1.0.18               h27ca646_1    conda-forge
libsolv                   0.7.28               h1059232_2    conda-forge
libsqlite                 3.45.2               h091b4b1_0    conda-forge
libssh2                   1.11.0               h7a5bd25_0    conda-forge
libtiff                   4.6.0                h07db509_3    conda-forge
libunistring              0.9.10               h3422bc3_0    conda-forge
libwebp-base              1.4.0                h93a5062_0    conda-forge
libxcb                    1.15                 hf346824_0    conda-forge
libxml2                   2.12.6               h0d0cfa8_1    conda-forge
libzlib                   1.2.13               h53f4e23_5    conda-forge
llvm-openmp               18.1.8               hde57baf_1    conda-forge
lz4-c                     1.9.4                hb7217d7_0    conda-forge
lzo                       2.10              h642e427_1000    conda-forge
mamba                     1.5.8           py310ha5d4528_0    conda-forge
markupsafe                2.1.5           py310h493c2e1_1    conda-forge
matplotlib                3.9.2           py310hb6292c7_0    conda-forge
matplotlib-base           3.9.2           py310heb73f16_0    conda-forge
matplotlib-inline         0.1.7              pyhd8ed1ab_0    conda-forge
menuinst                  2.0.2           py310hbe9552e_0    conda-forge
mistune                   3.0.2              pyhd8ed1ab_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
nbclient                  0.10.0             pyhd8ed1ab_0    conda-forge
nbconvert-core            7.16.4             pyhd8ed1ab_1    conda-forge
nbformat                  5.10.4             pyhd8ed1ab_0    conda-forge
ncurses                   6.4.20240210         h078ce10_0    conda-forge
nest-asyncio              1.6.0              pyhd8ed1ab_0    conda-forge
notebook                  7.2.2              pyhd8ed1ab_0    conda-forge
notebook-shim             0.2.4              pyhd8ed1ab_0    conda-forge
numpy                     2.1.1           py310hcaf17df_0    conda-forge
openjpeg                  2.5.2                h9f1df11_0    conda-forge
openssl                   3.3.2                h8359307_0    conda-forge
overrides                 7.7.0              pyhd8ed1ab_0    conda-forge
packaging                 24.1               pyhd8ed1ab_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
parso                     0.8.4              pyhd8ed1ab_0    conda-forge
pexpect                   4.9.0              pyhd8ed1ab_0    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    10.3.0          py310h81a8c2e_0    conda-forge
pip                       24.0               pyhd8ed1ab_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_1    conda-forge
platformdirs              4.3.2              pyhd8ed1ab_0    conda-forge
pluggy                    1.5.0              pyhd8ed1ab_0    conda-forge
prometheus_client         0.20.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.47             pyha770c72_0    conda-forge
prompt_toolkit            3.0.47               hd8ed1ab_0    conda-forge
psutil                    6.0.0           py310h493c2e1_1    conda-forge
pthread-stubs             0.4               h27ca646_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pure_eval                 0.2.3              pyhd8ed1ab_0    conda-forge
pybind11-abi              4                    hd8ed1ab_3    conda-forge
pycosat                   0.6.6           py310h2aa6e3c_0    conda-forge
pycparser                 2.22               pyhd8ed1ab_0    conda-forge
pyerfa                    2.0.1.4         py310hae04be4_2    conda-forge
pygments                  2.18.0             pyhd8ed1ab_0    conda-forge
pyobjc-core               10.3.1          py310hb3dec1a_1    conda-forge
pyobjc-framework-cocoa    10.3.1          py310hb3dec1a_1    conda-forge
pyparsing                 3.1.4              pyhd8ed1ab_0    conda-forge
pyproject-api             1.7.1              pyhd8ed1ab_0    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
python                    3.10.14         h2469fbe_0_cpython    conda-forge
python-dateutil           2.9.0              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.20.0             pyhd8ed1ab_0    conda-forge
python-json-logger        2.0.7              pyhd8ed1ab_0    conda-forge
python_abi                3.10                    4_cp310    conda-forge
pytz                      2024.2             pyhd8ed1ab_0    conda-forge
pyyaml                    6.0.2           py310h493c2e1_1    conda-forge
pyzmq                     26.2.0          py310hcab215c_0    conda-forge
qhull                     2020.2               h420ef59_5    conda-forge
readline                  8.2                  h92ec313_1    conda-forge
referencing               0.35.1             pyhd8ed1ab_0    conda-forge
reproc                    14.2.4.post0         h93a5062_1    conda-forge
reproc-cpp                14.2.4.post0         h965bd2d_1    conda-forge
requests                  2.31.0             pyhd8ed1ab_0    conda-forge
rfc3339-validator         0.1.4              pyhd8ed1ab_0    conda-forge
rfc3986-validator         0.1.1              pyh9f0ad1d_0    conda-forge
rpds-py                   0.20.0          py310h7a930dc_1    conda-forge
ruamel.yaml               0.18.6          py310hd125d64_0    conda-forge
ruamel.yaml.clib          0.2.8           py310hd125d64_0    conda-forge
scipy                     1.14.1          py310h35b72dc_0    conda-forge
send2trash                1.8.3              pyh31c8845_0    conda-forge
setuptools                69.5.1             pyhd8ed1ab_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
sniffio                   1.3.1              pyhd8ed1ab_0    conda-forge
soupsieve                 2.5                pyhd8ed1ab_1    conda-forge
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
terminado                 0.18.1             pyh31c8845_0    conda-forge
tinycss2                  1.3.0              pyhd8ed1ab_0    conda-forge
tk                        8.6.13               h5083fa2_1    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
tornado                   6.4.1           py310h493c2e1_1    conda-forge
tox                       4.18.1             pyhd8ed1ab_0    conda-forge
tqdm                      4.66.2             pyhd8ed1ab_0    conda-forge
traitlets                 5.14.3             pyhd8ed1ab_0    conda-forge
truststore                0.8.0              pyhd8ed1ab_0    conda-forge
types-python-dateutil     2.9.0.20240906     pyhd8ed1ab_0    conda-forge
typing-extensions         4.12.2               hd8ed1ab_0    conda-forge
typing_extensions         4.12.2             pyha770c72_0    conda-forge
typing_utils              0.1.0              pyhd8ed1ab_0    conda-forge
tzdata                    2024a                h0c530f3_0    conda-forge
unicodedata2              15.1.0          py310h2aa6e3c_0    conda-forge
uri-template              1.3.0              pyhd8ed1ab_0    conda-forge
urllib3                   2.2.1              pyhd8ed1ab_0    conda-forge
virtualenv                20.26.4            pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.13             pyhd8ed1ab_0    conda-forge
webcolors                 24.8.0             pyhd8ed1ab_0    conda-forge
webencodings              0.5.1              pyhd8ed1ab_2    conda-forge
websocket-client          1.8.0              pyhd8ed1ab_0    conda-forge
wget                      1.21.4               he2df1f1_0    conda-forge
wheel                     0.43.0             pyhd8ed1ab_1    conda-forge
widgetsnbextension        4.0.13             pyhd8ed1ab_0    conda-forge
xorg-libxau               1.0.11               hb547adb_0    conda-forge
xorg-libxdmcp             1.1.3                h27ca646_0    conda-forge
xz                        5.2.6                h57fd34a_0    conda-forge
yaml                      0.2.5                h3422bc3_2    conda-forge
yaml-cpp                  0.8.0                h13dd4ca_0    conda-forge
zeromq                    4.3.5                hcc0f68c_4    conda-forge
zipp                      3.20.2             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               h53f4e23_5    conda-forge
zstandard                 0.22.0          py310h6289e41_0    conda-forge
zstd                      1.5.5                h4f39d0f_0    conda-forge

On an arm64 macbook. Note the up to date versions of cmake and swig.

I had the installation failing before on the CMake Error at cmake/Modules/FindNumPy.cmake:70 (list) I posted above in exactly the same env minus only setuptools and wheel.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
BUG Installation
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
6 participants
@itrharrison @arthurmloureiro @halecatherine @tilmantroester @abhavishwakarma123 @hsinfan1996