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@EddyRivasLab

The Eddy/Rivas Laboratory

Computational genome sequence analysis, especially of RNA

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  1. hmmer hmmer Public

    HMMER: biological sequence analysis using profile HMMs

    C 318 70

  2. infernal infernal Public

    RNA secondary structure/sequence profiles for homology search and alignment

    C 100 24

  3. easel easel Public

    Sequence analysis library used by Eddy/Rivas lab code

    C 46 27

  4. R-scape R-scape Public

    RNA Structural Covariation Above Phylogenetic Expectation

    C 7 2

  5. ssu-align ssu-align Public

    Structural alignment of SSU rRNA sequences

    PostScript 4

  6. R-scape-web R-scape-web Public

    RNA Structure-driven Covariation Above Phylogenetic Expectation (web application)

    JavaScript 3 1

Repositories

Showing 10 of 14 repositories
  • infernal Public

    RNA secondary structure/sequence profiles for homology search and alignment

    EddyRivasLab/infernal’s past year of commit activity
    C 100 24 0 0 Updated Nov 8, 2024
  • labbib Public

    Lab's BibTex bibliography, and tools

    EddyRivasLab/labbib’s past year of commit activity
    TeX 1 0 0 0 Updated Nov 4, 2024
  • easel Public

    Sequence analysis library used by Eddy/Rivas lab code

    EddyRivasLab/easel’s past year of commit activity
    C 46 27 3 2 Updated Oct 28, 2024
  • hmmer Public

    HMMER: biological sequence analysis using profile HMMs

    EddyRivasLab/hmmer’s past year of commit activity
    C 318 70 11 2 Updated Oct 16, 2024
  • R-scape Public

    RNA Structural Covariation Above Phylogenetic Expectation

    EddyRivasLab/R-scape’s past year of commit activity
    C 7 2 1 0 Updated Sep 29, 2024
  • eddyrivaslab.github.io Public
    EddyRivasLab/eddyrivaslab.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Aug 26, 2024
  • eddyrivaslab.github.io-src Public
    EddyRivasLab/eddyrivaslab.github.io-src’s past year of commit activity
    CSS 0 0 0 0 Updated Aug 26, 2024
  • R-scape-web Public

    RNA Structure-driven Covariation Above Phylogenetic Expectation (web application)

    EddyRivasLab/R-scape-web’s past year of commit activity
    JavaScript 3 1 0 0 Updated Feb 6, 2024
  • infernal.org Public

    Infernal's web page

    EddyRivasLab/infernal.org’s past year of commit activity
    HTML 0 0 0 0 Updated Sep 11, 2023
  • hmmer.org Public

    HMMER home page

    EddyRivasLab/hmmer.org’s past year of commit activity
    HTML 0 0 0 0 Updated Aug 15, 2023
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