Our documentation website is now live: https://ccbr.github.io/nf-modules/ (#16)
New modules
- bwa/index
- bwa/mem
- also runs samtools sort & outputs index in bai format. (#12)
- custom/bam2fastq (#14,#22)
- custom/convertsicer (#36)
- custom/countfastq (#32)
- cutadapt (#11)
- khmer/uniquekmers (#7)
- picard/samtofastq (#21)
- samtools/filteraligned (#13,#20)
- samtools/sort (#24,#28)