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Analysis of skin microbiome of Rana luteiventris frogs from northern Idaho and eastern Washington using QIIME 2, LEfSe, and R.

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qiime-2-skin-microbiome

Analysis of skin microbiome of Rana luteiventris frogs from northern Idaho and eastern Washington using QIIME 2, LEfSe, and R.

Setup

QIIME 2 version 2019.10 was used for this study. https://docs.qiime2.org/2019.10/

If lack access to a Linux environment, VirtualBox is recommended. https://docs.qiime2.org/2019.10/install/virtual/virtualbox/

DNA sequencing data

The DNA sequencing data was submitted to the NCBI SRA database (BioProject accession PRJNA757404). https://www.ncbi.nlm.nih.gov/bioproject/PRJNA757404

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Analysis of skin microbiome of Rana luteiventris frogs from northern Idaho and eastern Washington using QIIME 2, LEfSe, and R.

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