Python Package for the downstream analysis of mass-spectrometry-based proteomics data
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Updated
Nov 27, 2024 - Jupyter Notebook
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spectronaut
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This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to provide contaminant protein FASTA and spectral libraries that can be universally applied to DDA and DIA proteomics and freely accessible for the proteomics community.
fasta
proteomics
dia
dda
metabolomics
mass-spectrometry
contamination
mitochondrion
neurodegeneration
dia-nn
lysosome
keratin
spectronaut
trypsin
streptavidin
bioanalytical-chemistry
protein-contaminant
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Updated
Nov 24, 2024
A Python script to convert the spectral library in BLIB format (.blib) from either Skyline or BiblioSpec to readable library format (OpenSwath or Spectronaut libraries)
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Updated
Sep 23, 2023 - Python
Generate a spectral library for Spectronaut from MS Annika results.
python
fragments
library
spectral
proteomics
mass-spectrometry
spectrometry
mass
cross-linking
ms2
spectral-library
fragment-ions
crosslinking
spectronaut
xlms
crosslinker
tandem-ms
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Updated
Nov 26, 2024 - Python
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