Ontology for the description of human clinical features

An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/

A Python package for pharmacogenomics (PGx) research

Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.

Explore the Plant Trait Ontology on the Planteome site.

An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data

Python library for extracting HPO encoded phenotypes from text

Standard terms for annotating mammalian phenotypic data

An Open Source Web Application for Genetic Data (SNPs) Data Crawling

Modeling and Analysis of (Statistical) Genetics data in python

The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and X. tropicalis.

Preparatory scripts for BIDS tabular phenotypic data in large neuroimaging datasets.

Human Phenotype Ontology Website

Mapping complex genotypes to phenotypic subclusters

Bayesian ontology querying from Bauer et al.

A command line utility for operating over Phenotype eXchange Format (PXF) files.

GUI for drug and phenotype ontology visualization