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oaklib

Here are 6 public repositories matching this topic...

monarch-initiative / ontogpt

LLM-based ontological extraction tools, including SPIRES

nlp ai information-extraction named-entity-recognition language-models ner data-modeling relation-extraction monarchinitiative obofoundry gpt-3 linkml large-language-models llm oaklib chat-gpt

Updated Nov 23, 2024
Jupyter Notebook

INCATools / ontology-access-kit

Ontology Access Kit: A python library and command line application for working with ontologies

python rdf semantic-web owl ontology apis geneontology monarchinitiative obofoundry ontology-api oaklib

Updated Oct 22, 2024
Python

INCATools / semantic-sql

SQL and SQLite builds of OWL ontologies

sql sparql owl ontologies obofoundry linkml relation-graph oaklib

Updated Aug 14, 2024
Python

cmungall / semantic-llama

A knowledge extraction tool that uses a large language model to extract semantic information from text

ai language-models obofoundry knowledge-extraction linkml oaklib

Updated Jan 3, 2023
Python

Knowledge-Graph-Hub / kg-microbe

nlp go robot media knowledge-graph named-entity-recognition microbiology metabolism traits phenotypes data-modeling environments chemicals chebi envo oaklib anatomical-knowledge ncbitaxonomy cell-shapes

Updated Nov 22, 2024
Jupyter Notebook

INCATools / oakx-plugin-cookiecutter

cookiecutter for OAK plugins

plugins cookiecutter oaklib

Updated Jan 11, 2023
Python

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