ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.
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Nov 7, 2024 - Rust
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metagenomics
Here are 13 public repositories matching this topic...
Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.
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Jul 14, 2024 - Rust
kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more
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Sep 26, 2024 - Rust
Viral genome coverage evaluation for metagenomic diagnostics 🩸
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Nov 19, 2024 - Rust
MetagenOmic read Re-Assigner and abundance quantifier
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Jun 19, 2024 - Rust
Host depletion optimised for clinical metagenomic sequencing applications 🐼
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Nov 18, 2024 - Rust
Kun-peng: an ultra-fast, low-memory footprint and accurate taxonomy classifier for all
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Nov 20, 2024 - Rust
A taxonomic classifier for shotgun metagenomics reads
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Feb 28, 2024 - Rust
🐦 spideog - Command line utility for Kraken2 reports.
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Nov 30, 2020 - Rust
Metagenomic diagnostics stack for low abundance sample types and clinical reporting
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Nov 25, 2024 - Rust
rust pangenome for pangenome alignments
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Nov 12, 2024 - Rust
Metagenomic toolbox / Outils de métagénomique
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Nov 11, 2024 - Rust
PhageFilter uses a Sequence Bloom Tree (SBT) to filter bacteriophage reads from metagenomic files.
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Dec 10, 2023 - Rust
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