GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.

pipeline to perform gbs and genetic fitness analysis

A set of job submission scripts to run STACKS (http://catchenlab.life.illinois.edu/stacks/) on a computer cluster with TORQUE/MAUI scheduler. All the files were used to generate GBS data analyses published on the manuscript

Wrapper scripts for TASSEL (Trait Analysis by aSSociation, Evolution and Linkage) and UNEAK (Universal Network Enabled Analysis Kit) v3.0 Genotyping by Sequencing (GBS) analysis pipelines