CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.

RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8

A python project for analysis of codon usage for gene or genome analysis

Cho codon optimization WIP

Multi-bAse Codon-Associated variant Re-annotatiON (MACARON)

🧬🦠🧪 [research][wip] Library for working with DNA, RNA, and etc acids

Interspecies protein translator + translation optimizer

The codon project was created to increase code sharing, code consistency, coding standards, and encourage collaboration. Package documentation is available on the GitHub pages. codonPython aims to reduce the barrier for entry for analysis and provide software development experience for those at a higher level of technical ability.

システム上で使用する暗号化システムに、mRNAコドンの仕組みを応用する研究です

Parallel demonstrations for counting and printing prime numbers

Analysis of codon positional dependency

Protein to RNA reverse translation

Implementation of the "Ray Tracing in One Weekend" books using Codon

A little independent Python algorithm capable of finding Open Reading Frames in any genomic sequence.

Generates a codon-based alignment from an amino acid alignment and CDS sequences

overcomplicated biology project spaghetti code written at 3 am ¯\_(ツ)_/¯

A script for codon harmonization.

Here you can find basically most of the exercises I'm solving during my University journey. This repo will contain lots of folders inside of it, each of one related to one subject. It won't be limited to one language.

Comprehensive in silico genomic analysis pipeline for domesticating non-model bacteria

A Simple Stop Codon Reassignment Detector in Silico