Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.
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Updated
Aug 24, 2022 - HTML
Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.
💯 Snakemake-based amplicon processing protocol for 16S and ITS sequences.
Dadaist2 🟨 Highway to R
Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project
Microbiome Study of Lupus Patients
Benbow Lab at Michigan State University, Tutorials/example data for analysis of: 16S data, VCF files
This website gives an introduction to microbial community analysis.
Anchor is a 16S rRNA gene amplicon pipeline for microbial analysis of multiple environmental samples.
High Throughput Sequencing at your fingertips
Data from ecological studies about how the climate change drives the microbial community dinamycs in aquatic ecosystems
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