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PenguiN Reproducibility

Status: Open.

#53 In soedinglab/plass;

· MTDouglas opened on Dec 26, 2024

Manual PenguiN

Status: Open.

#52 In soedinglab/plass;

· SergeyBaikal opened on Dec 24, 2024

Penguin performance for ITS/18S assembly and potential implementation for metagenome binning?

Status: Open.

#51 In soedinglab/plass;

· metaganal opened on Dec 20, 2024

SNPs introduced when using high --max-iterations

Status: Open.

#50 In soedinglab/plass;

· Markusjsommer opened on Nov 1, 2024

Feature requests: (Un)trusted contigs and mixed read types support

Status: Open.

#49 In soedinglab/plass;

· ohickl opened on Sep 13, 2024

Data Access

Status: Open.

#48 In soedinglab/plass;

· shengxiaobufu opened on Aug 24, 2024

Penguin: no assembled contigs

Status: Open.

#47 In soedinglab/plass;

· cv-1993 opened on Aug 14, 2024

Insights needed for comparison with other assemblers

Status: Open.

#46 In soedinglab/plass;

· GeoMicroSoares opened on Apr 16, 2024

Quality trimming reads?

Status: Open.

#44 In soedinglab/plass;

· timghaly opened on Feb 19, 2024

mmseqs extractorfs can tranlate orfs but CLI does not allow to specify tranlation table

Status: Open.

#42 In soedinglab/plass;

· SilasK opened on Mar 10, 2023

Quantification

Status: Open.

#40 In soedinglab/plass;

· stheil15 opened on Jan 23, 2023

Paired read prediction - mergereads failed

Status: Open.

#38 In soedinglab/plass;

· dnolin13 opened on Mar 11, 2022