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SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 1k 184

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 79 36

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 63 27

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 57 17

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 45 12

  6. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 39 15

Repositories

Showing 10 of 125 repositories
  • introduction-to-unix Public

    Introduction to Linux and the Bash shell

    sib-swiss/introduction-to-unix’s past year of commit activity
    1 0 0 0 Updated Feb 17, 2025
  • sparql-llm Public

    🦜✨ Chat system and reusable components to improve LLMs capabilities when generating SPARQL queries

    sib-swiss/sparql-llm’s past year of commit activity
    Jupyter Notebook 21 MIT 2 1 0 Updated Feb 17, 2025
  • sparql-examples Public

    A set of SPARQL examples that are used in different SIB resources

    sib-swiss/sparql-examples’s past year of commit activity
    HTML 12 15 5 (1 issue needs help) 3 Updated Feb 17, 2025
  • kgsteward Public

    Knowledge Graph Steward - Command line tool to help manage RDF store

    sib-swiss/kgsteward’s past year of commit activity
    Python 6 GPL-3.0 2 0 0 Updated Feb 17, 2025
  • sparql-examples-utils Public Forked from sib-swiss/sparql-examples

    A tool to maintain and test your SPARQL examples

    sib-swiss/sparql-examples-utils’s past year of commit activity
    Java 4 15 14 1 Updated Feb 17, 2025
  • training-collection Public

    Collection of bioinformatics training materials

    sib-swiss/training-collection’s past year of commit activity
    Python 1,005 184 1 0 Updated Feb 16, 2025
  • single-cell-python-training Public
    sib-swiss/single-cell-python-training’s past year of commit activity
    HTML 3 CC-BY-4.0 0 0 0 Updated Feb 16, 2025
  • spatial-transcriptomics-training Public
    sib-swiss/spatial-transcriptomics-training’s past year of commit activity
    R 2 CC-BY-4.0 1 1 0 Updated Feb 16, 2025
  • glittr-stats Public

    General statistics of Glittr.org. Comes with the manuscript.

    sib-swiss/glittr-stats’s past year of commit activity
    PostScript 1 0 0 0 Updated Feb 16, 2025
  • cancer-variants-training Public
    sib-swiss/cancer-variants-training’s past year of commit activity
    Lua 4 CC-BY-4.0 2 0 0 Updated Feb 16, 2025
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