[0.7.0] - 2025-05-05

Special thanks to the following for their contributions to the release:

• Edmund Miller
• Florian Wuennemann
• Maxime Garcia

Thank you to everyone else that has contributed by reporting bugs, enhancements or in any other way, shape or form.

Enhancements & fixes

• PR #88 - Update tw cli container version to 0.11.2 and allow .nextflow.log to be missing from tw call
• PR #89 - Enable usage of external run dumps with nf-aggregate & update devcontainer specifications
• PR #91 - Update benchmark report image to include a fix causing large memory footprint for reshaping large AWS cost report files

Software dependencies

What's Changed

• Updated seqera_run_dumps container and error handling in script block by @FloWuenne in #88
• Enable using external run logs with nf-aggregate by @FloWuenne in #89
• Bumped version to 0.7.0 to prepare for release by @FloWuenne in #90
• Bump benchmark image version by @FloWuenne in #91
• Dev -> Main for release 0.7.0 by @FloWuenne in #92

Full Changelog: 0.6.0...0.7.0

[0.6.0] - 2025-03-31

Credits

Special thanks to the following for their contributions to the release:

• Edmund Miller
• Rob Syme
• Maxime Garcia
• Esha Joshi
• Florian Wuennemann

Thank you to everyone else that has contributed by reporting bugs, enhancements or in any other way, shape or form.

Enhancements & fixes

• PR #71 - Reduce stuttering in nextflow_schema.json
• PR #74 - Add process for generating Benchmark reports
• PR #75 - Skip failed jobs in benchmarking report
• PR #78 - Sync with nf-core tools 3.2.0
• PR #80 - Snapshots for pipeline level tests with nft-utils
• PR #81 - Update report parameters and fix option to remove cost analysis
• PR #82 - Loosened samplesheet validation for benchmark groups
• PR #84 - Added CUR2.0 support to benchmark reports and fixed task table cost

Software dependencies

NB: Dependency has been updated if both old and new version information is present.

NB: Dependency has been added if just the new version information is present.

NB: Dependency has been removed if new version information isn't present.

New Contributors

• @edmundmiller made their first contribution in #75
• @FloWuenne made their first contribution in #73

Full Changelog: 0.5.0...0.6.0

[0.5.0] - 2024-11-12

Credits

Special thanks to the following for their contributions to the release:

• Adam Talbot
• Esha Joshi
• Jonathan Manning
• Maxime Garcia
• Rob Syme

Thank you to everyone else that has contributed by reporting bugs, enhancements or in any other way, shape or form.

Enhancements & fixes

• PR #61 - Remove dependency on external library/grape
• PR #63 - Add maxForks setting for Seqera CLI to overcome API issues
• PR #65 - Replace eclint GHA by pre-commit
• PR #67 - Update tests to use a non-fusion run from Seqera Cloud community/showcase
• PR #69 - Fix parsing of extra args to tw CLI

[0.4.0] - 2024-07-26

Credits

Special thanks to the following for their contributions to the release:

• Friederike Hanssen

Thank you to everyone else that has contributed by reporting bugs, enhancements or in any other way, shape or form.

Enhancements & fixes

PR #52 - Organise results folder structure by pipeline
PR #53 - Throw exception and terminate workflow in case config can't be read
PR #57 - Check if fusion is enabled via the Platform API

[0.3.0] - 2024-07-01

Credits

Special thanks to the following for their contributions to the release:

• Adam Talbot
• Esha Joshi
• Rob Syme

Thank you to everyone else that has contributed by reporting bugs, enhancements or in any other way, shape or form.

Enhancements & fixes

PR #49 - Add custom java truststore support and improved exception handling

[0.2.0] - 2024-05-29

Credits

Special thanks to the following for their contributions to the release:

• Adam Talbot
• Arthur Vigil
• Esha Joshi
• Jonathan Manning
• Maxime Garcia
• Rob Syme

Thank you to everyone else that has contributed by reporting bugs, enhancements or in any other way, shape or form.

Enhancements & fixes

PR #19 - Allow underscores in workspace name regex
PR #22 - Copy in nf-test CI from nf-core/fetchngs
PR #23 - Bump Platform CLI version to 0.9.2
PR #27 - Remove escape from TOWER_ACCESS_TOKEN env var
PR #28 - Remove special chars from Seqera CLI version
PR #29 - Bump image for PLOT_GANTT process for Singularity
PR #30 - Skip Gantt plots with non-fusion runs
PR #31 - Update Platform API URI
PR #32 - Update all nf-core modules and subworkflows
PR #33 - Remove docker.userEmulation
PR #40 - Sync with nf-core tools 2.14.1

Software dependencies

NB: Dependency has been updated if both old and new version information is present.

NB: Dependency has been added if just the new version information is present.

NB: Dependency has been removed if new version information isn't present.

What's Changed

• Update pipeline-gantt.py by @robsyme in #1
• Use default "unknown" machine type if not specified in fusion logs (likely head node) by @robsyme in #2
• Parameter for api_url and get run_name and workDir from Seqera Platform API by @robsyme in #5
• Add gitpod yml by @pinin4fjords in #8
• Minor doc fixes by @pinin4fjords in #9
• Add devcontainer by @pinin4fjords in #10
• Publish runs dump by pipeline name by @drpatelh in #12
• Set up for nf-test by @pinin4fjords in #11
• Add gantt plot nf-test by @pinin4fjords in #13
• Add pipeline-level nf-tests by @pinin4fjords in #14
• Move nf-test files and container definitions by @drpatelh in #15
• Update CHANGELOG and bump pipeline version by @drpatelh in #17

New Contributors

• @robsyme made their first contribution in #1
• @pinin4fjords made their first contribution in #8
• @drpatelh made their first contribution in #12

Full Changelog: https://github.com/seqeralabs/nf-aggregate/commits/0.1.0