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Import errors when using the docker container

Status: Open.

#20 In pangenome/spodgi;

· heringerp opened on Mar 2, 2024

odgi_to_rdf misleading error message when 2nd argument is missing

Status: Open.

#10 In pangenome/spodgi;

· subwaystation opened on Nov 26, 2019

Validate Prefixes

Status: Open.

#9 In pangenome/spodgi;

· subwaystation opened on Nov 24, 2019

How to query SpOdgi to get external Ensembl annotations

Status: Open.

#8 In pangenome/spodgi;

· JervenBolleman opened on Nov 22, 2019

Inspect filters to see if they can be translated a better execution model.

optimization

Status: Open.

#5 In pangenome/spodgi;

· JervenBolleman opened on Oct 23, 2019

Best way to turn for_each_handle into a generator instead of an internal iterator

help wantedExtra attention is neededExtra attention is needed

Status: Open.

#4 In pangenome/spodgi;

· JervenBolleman opened on Oct 22, 2019

Integrate ODGI as a submodule into the repository?

Status: Open.

#3 In pangenome/spodgi;

· subwaystation opened on Oct 22, 2019

Mapping an IRI based lookup to ODGI

Status: Open.

#2 In pangenome/spodgi;

· JervenBolleman opened on Oct 21, 2019

Make this Conda, pip install etc. friendly

help wantedExtra attention is neededExtra attention is needed

Status: Open.

#1 In pangenome/spodgi;

· JervenBolleman opened on Oct 18, 2019