Skip to content

Pull requests: nf-core/modules

New pull request New
178 Open 5,084 Closed
178 Open 5,084 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

UMICollapse module: Drop external dependencies from UMICollapse module tests
#7075 opened Nov 24, 2024 by MatthiasZepper Loading…
3 of 7 tasks
reduce memory for meryl count to avoid crash
#7074 opened Nov 24, 2024 by MartinPippel Loading…
@MartinPippel
homer groseq update
#7073 opened Nov 24, 2024 by edmundmiller • Draft
@edmundmiller
Updated the meta.yml of subworkflows subworkflows update subworkflow
#7072 opened Nov 23, 2024 by muneebdev7 Loading…
2 of 17 tasks
1
Update decoupler
#7068 opened Nov 22, 2024 by edmundmiller Loading…
1
@edmundmiller
SHAPEIT5_SWITCH Migrate to nf-test nf-test
#7066 opened Nov 22, 2024 by LouisLeNezet Loading…
17 tasks
SHAPEIT5_PHASERARE Migrate to nf-test nf-test
#7064 opened Nov 22, 2024 by LouisLeNezet Loading…
17 tasks
Initial addition. Works.
#7062 opened Nov 22, 2024 by ramirobarrantes Loading…
1 task
SHAPEIT5_PHASECOMMON Migrate to nf-test nf-test
#7061 opened Nov 22, 2024 by LouisLeNezet Loading…
17 tasks
SHAPEIT5_LIGATE Migration to nf-test nf-test
#7060 opened Nov 22, 2024 by LouisLeNezet Loading…
4 of 17 tasks
Add sam2lca/updadb module
#7059 opened Nov 22, 2024 by maxibor Loading…
11 tasks done
Change Samtools/view to use same container as all other samtools modules
#7058 opened Nov 22, 2024 by tkchafin Loading…
17 tasks
Add Test Report
#7053 opened Nov 22, 2024 by edmundmiller • Draft
@edmundmiller
Add module gzrt (#6918) new module Adding a new module Ready for Review
#7052 opened Nov 21, 2024 by mazzalab Loading…
13 of 14 tasks
1
@mazzalab
Added subworkflow fasta_gxf_busco_plot
#7051 opened Nov 21, 2024 by GallVp Loading…
2 of 17 tasks
1
9
Bcftools convert migration to nf-test nf-test
#7049 opened Nov 21, 2024 by LouisLeNezet Loading…
4 of 17 tasks
Fix tcoffee alncompare
#7048 opened Nov 21, 2024 by luisas Loading…
12 of 14 tasks
update Trinity version
#7044 opened Nov 21, 2024 by avani-bhojwani Loading…
12 of 14 tasks
2
Include sizes in samtools faidx
#7041 opened Nov 20, 2024 by maxulysse Loading…
17 tasks
Update bowtie2 align test
#7038 opened Nov 20, 2024 by sateeshperi Loading…
@sateeshperi
2
bismark/align - use more descriptive variable names than it in test
#7035 opened Nov 20, 2024 by sateeshperi Loading…
@sateeshperi
Update bclconvert
#7034 opened Nov 20, 2024 by sateeshperi Loading…
2
Cellbender empty droplet removal new subworkflow Ready for Review
#7031 opened Nov 19, 2024 by chaochaowong Loading…
13 of 17 tasks
@SPPearce @nictru
5
PoC: Use Fusion for test workdir
#7030 opened Nov 19, 2024 by edmundmiller • Draft
@edmundmiller
build: Add nf-co2footprint to CI runs
#7029 opened Nov 19, 2024 by edmundmiller • Draft
@edmundmiller
ProTip! Updated in the last three days: updated:>2024-11-21.