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params.yaml duplex_seq

Status: Open.

#92 In nf-core/fastquorum;

· lauren-tjoeka opened on Nov 14, 2024

Add support for .fastq file format.

enhancementNew feature or requestNew feature or request

Status: Open.

#91 In nf-core/fastquorum;

· Pg-Pi3Gey opened on Nov 12, 2024

The retry strategy used for memory / cpu usage in FastQC and consensus reads is brittle

bugSomething isn't workingSomething isn't working

Status: Open.

#73 In nf-core/fastquorum;

· lbeltrame opened on Sep 5, 2024

Update the validation* arguments as per the nf-schema migration guide

enhancementNew feature or requestNew feature or request

Status: Open.

#65 In nf-core/fastquorum;

· nh13 opened on Jul 19, 2024

Add KAPA to the list of Vendors/Kits

enhancementNew feature or requestNew feature or request

Status: Open.

#61 In nf-core/fastquorum;

· nh13 opened on Jul 15, 2024

RFE: Quality trimming in the pipeline

enhancementNew feature or requestNew feature or request

Status: Open.

#55 In nf-core/fastquorum;

· lbeltrame opened on Jun 4, 2024

Error at GroupReadsByUmi due to read order?

bugSomething isn't workingSomething isn't working

Status: Open.

#52 In nf-core/fastquorum;

· davidmasp opened on May 28, 2024

Improve the output usage

enhancementNew feature or requestNew feature or request

Status: Open.

#47 In nf-core/fastquorum;

· nh13 opened on May 23, 2024

Add additional metrics to MultiQC

enhancementNew feature or requestNew feature or request

Status: Open.

#46 In nf-core/fastquorum;

· nh13 opened on May 23, 2024

Use updated fgbio modules in nf-core/modules

enhancementNew feature or requestNew feature or request

Status: Open.

#45 In nf-core/fastquorum;

· nh13 opened on May 23, 2024

Use fgbio-slim when not producing plots

enhancementNew feature or requestNew feature or request

Status: Open.

#40 In nf-core/fastquorum;

· nh13 opened on May 20, 2024

Alternative specification of FASTQs and read structures

enhancementNew feature or requestNew feature or request

Status: Open.

#39 In nf-core/fastquorum;

· nh13 opened on May 19, 2024