Popular repositories Loading

1. Python-Projects Python-Projects Public

   Explore versatile applications of Python, providing real-world solutions through innovative problem-solving. Connect, explore, and dive into a portfolio of my Python skills. Questions or feedback? …

   Jupyter Notebook 1

2. RNA-Seq RNA-Seq Public template

   RNA-Seq analysis pipeline for investigating transcriptional changes during mammalian cardiac regeneration.

   HTML 1

3. ChIP-Seq ChIP-Seq Public

   ChIP-seq analysis pipeline encompassing data processing, quality control, alignment, peak calling, annotation and motif analysis.

   1

4. ATAC-Seq ATAC-Seq Public

   Comprehensive analysis pipeline for ATAC-seq data including QC, alignment, peak calling, annotation, motif analysis, and gene enrichment. Delivers key insights and reproducible results for chromati…

   HTML 1

5. Phenotypic-Clustering Phenotypic-Clustering Public

   Explore disease relationships and similarities by utilizing Human Phenotype Ontology Annotation (HPOA) data. This could potentially offer insights into disease classifications, genetic associations…

   Python 1

6. cEpiReg cEpiReg Public

   Our comprehensive database integrates data from scRNA seq and sc-ATAC seq, identifying cis-regulatory elements (CREs) through comparison with ENCODE, Epimap, GWAS Catalog, and other datasets. By co…

   HTML 1