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migrate hive generator (#1641)
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* migrate hive generator
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clojurians-org authored Apr 22, 2020
1 parent c97d3fc commit c7851b7
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23 changes: 18 additions & 5 deletions contrib/metadata-ingestion/README.md
Original file line number Diff line number Diff line change
Expand Up @@ -13,9 +13,9 @@ i split the ingestion procedure to two part: [datahub-producer] and different [m
- [X] datahub-producer load json avro data.
- [X] add lineage-hive generator
- [X] add dataset-jdbc generator[include [mysql, mssql, postgresql, oracle] driver]
- [ ] enhance dataset-jdbc generator [hive-driver]
- [X] add dataset-hive generator
- [ ] *> add lineage-oracle generator
- [ ] enhance lineage-jdbc generator to lazy iterator mode.
- [ ] add lineage-oracle generator
- [ ] enchance avro parser to show error information


Expand All @@ -31,22 +31,35 @@ i split the ingestion procedure to two part: [datahub-producer] and different [m
nix-channel --update nixpkgs
```

2. load json data to datahub
2. [optional] you can download specified dependency in advanced, or it will automatically download at run time.

```
nix-shell bin/[datahub-producer].hs.nix
nix-shell bin/[datahub-producer].py.nix
...
```

3. load json data to datahub

```
cat sample/mce.json.dat | bin/datahub-producer.hs config
```

3. parse hive sql to datahub
4. parse hive sql to datahub
```
ls sample/hive_*.sql | bin/lineage_hive_generator.hs | bin/datahub-producer.hs config
```

4. load jdbc schema(mysql, mssql, postgresql, oracle) to datahub
5. load jdbc schema(mysql, mssql, postgresql, oracle) to datahub
```
bin/dataset-jdbc-generator.hs | bin/datahub-producer.hs config
```

6. load hive schema to datahub
```
bin/dataset-hive-generator.py | bin/datahub-producer.hs config
```

## Reference

- hive/presto/vertica SQL Parser
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66 changes: 66 additions & 0 deletions contrib/metadata-ingestion/bin/dataset-hive-generator.py
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@@ -0,0 +1,66 @@
#! /usr/bin/env nix-shell
#! nix-shell dataset-hive-generator.py.nix -i python

import sys
import time
from pyhive import hive
from TCLIService.ttypes import TOperationState

import simplejson as json

HIVESTORE='localhost'

AVROLOADPATH = '../../metadata-events/mxe-schemas/src/renamed/avro/com/linkedin/mxe/MetadataChangeEvent.avsc'
KAFKATOPIC = 'MetadataChangeEvent'
BOOTSTRAP = 'localhost:9092'
SCHEMAREGISTRY = 'http://localhost:8081'

def hive_query(query):
"""
Execute the query to the HiveStore.
"""
cursor = hive.connect(HIVESTORE).cursor()
cursor.execute(query, async_=True)
status = cursor.poll().operationState
while status in (TOperationState.INITIALIZED_STATE, TOperationState.RUNNING_STATE):
logs = cursor.fetch_logs()
for message in logs:
sys.stdout.write(message)
status = cursor.poll().operationState
results = cursor.fetchall()
return results

def build_hive_dataset_mce(dataset_name, schema, metadata):
"""
Create the MetadataChangeEvent via dataset_name and schema.
"""
actor, type, created_time, upstreams_dataset, sys_time = "urn:li:corpuser:" + metadata[2][7:], str(metadata[-1][11:-1]), int(metadata[3][12:]), metadata[-28][10:], int(time.time())
owners = {"owners":[{"owner":actor,"type":"DATAOWNER"}],"lastModified":{"time":sys_time,"actor":actor}}
upstreams = {"upstreams":[{"auditStamp":{"time":sys_time,"actor":actor},"dataset":"urn:li:dataset:(urn:li:dataPlatform:hive," + upstreams_dataset + ",PROD)","type":"TRANSFORMED"}]}
elements = {"elements":[{"url":HIVESTORE,"description":"sample doc to describe upstreams","createStamp":{"time":sys_time,"actor":actor}}]}
schema_name = {"schemaName":dataset_name,"platform":"urn:li:dataPlatform:hive","version":0,"created":{"time":created_time,"actor":actor},
"lastModified":{"time":sys_time,"actor":actor},"hash":"","platformSchema":{"com.linkedin.pegasus2avro.schema.OtherSchema": {"rawSchema": schema}},
"fields":[{"fieldPath":"","description":{"string":""},"nativeDataType":"string","type":{"type":{"com.linkedin.pegasus2avro.schema.StringType":{}}}}]}

mce = {"auditHeader": None,
"proposedSnapshot":{"com.linkedin.pegasus2avro.metadata.snapshot.DatasetSnapshot":
{"urn": "urn:li:dataset:(urn:li:dataPlatform:hive,"+ dataset_name +",PROD)"
,"aspects": [
{"com.linkedin.pegasus2avro.common.Ownership": owners}
, {"com.linkedin.pegasus2avro.dataset.UpstreamLineage": upstreams}
, {"com.linkedin.pegasus2avro.common.InstitutionalMemory": elements}
, {"com.linkedin.pegasus2avro.schema.SchemaMetadata": schema_name}
]}},
"proposedDelta": None}

print(json.dumps(mce))

databases = hive_query('show databases')
for database in databases:
tables = hive_query('show tables in ' + database[0])
for table in tables:
dataset_name = database[0] + '.' + table[0]
description = hive_query('describe extended ' + dataset_name)
build_hive_dataset_mce(dataset_name, str(description[:-1][:-1]), description[-1][1].split(','))

sys.exit(0)
61 changes: 61 additions & 0 deletions contrib/metadata-ingestion/bin/dataset-hive-generator.py.nix
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@@ -0,0 +1,61 @@
with import <nixpkgs> {} ;
let
avro-python3-1_8 = python3Packages.buildPythonPackage rec {
pname = "avro-python3" ;
version = "1.8.2" ;

src = python3Packages.fetchPypi {
inherit pname version ;
sha256 = "f82cf0d66189600b1e6b442f650ad5aca6c189576723dcbf6f9ce096eab81bd6" ;
} ;
doCheck = false;
} ;

sasl = python3Packages.buildPythonPackage rec {
pname = "sasl" ;
version = "0.2.1" ;

src = python3Packages.fetchPypi {
inherit pname version ;
sha256 = "04f22e17bbebe0cd42471757a48c2c07126773c38741b1dad8d9fe724c16289d" ;
} ;
doCheck = false;
propagatedBuildInputs = [ cyrus_sasl ] ++ (with python3Packages ; [six]) ;
} ;

thrift_sasl = python3Packages.buildPythonPackage rec {
pname = "thrift_sasl" ;
version = "0.4.2" ;

src = python3Packages.fetchPypi {
inherit pname version ;
sha256 = "6a1c54731cb3ce61bdc041d9dc36e21f0f56db0163bb7b57be84de3fda70922f" ;
} ;
doCheck = false;
propagatedBuildInputs = with python3Packages; [ thrift sasl ] ;
} ;

PyHive = python3Packages.buildPythonPackage rec {
pname = "PyHive" ;
version = "0.6.1" ;

src = python3Packages.fetchPypi {
inherit pname version ;
sha256 = "a5f2b2f8bcd85a8cd80ab64ff8fbfe1c09515d266650a56f789a8d89ad66d7f4" ;
} ;
doCheck = false;
propagatedBuildInputs = with python3Packages ; [ dateutil future thrift sasl thrift_sasl ];
} ;

in
mkShell {
buildInputs = (with python3Packages ;[
python
requests
PyHive

simplejson
# avro-python3-1_8
# confluent-kafka
]) ;
}

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