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16 Open 84 Closed
16 Open 84 Closed
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Issues list

Is only generated if set_eggnog--decorate_gff=no which is not default bug Something isn't working
#114 opened Oct 31, 2024 by cmkobel 420
@cmkobel
Some version files are empty bug Something isn't working
#113 opened Oct 31, 2024 by cmkobel
Busco and antismash bug Something isn't working
#112 opened Oct 19, 2024 by bharat1912
Error in passthrough argument feature: Invalid config definition: Config entry must start with a valid identifier. bug Something isn't working
#109 opened Jul 25, 2024 by cmkobel
@cmkobel
4
Upgrade to snakemake 8 low priority
#100 opened May 14, 2024 by cmkobel
@cmkobel
1
Option to add .faa files for analysis downstream of gene calling high priority
#91 opened Feb 8, 2024 by cmkobel Reach 200 stars on Github
@cmkobel
wget should not use --continue, but somehow otherwise never write to an alternatively named file. enhancement New feature or request
#87 opened Feb 2, 2024 by cmkobel
@cmkobel
Messy directories enhancement New feature or request
#76 opened Jan 16, 2024 by cmkobel Reach 200 stars on Github
@cmkobel
1
Midpoint rooting in the report tree? feature request
#70 opened Nov 8, 2023 by cmkobel Reach 200 stars on Github
@cmkobel
Interactive plots in the report document feature request
#69 opened Nov 8, 2023 by cmkobel
@cmkobel
Feature request feature request
#62 opened Oct 11, 2023 by magnusarntzen Reach 200 stars on Github
@cmkobel
3
use mem_mib instead of mem_mb enhancement New feature or request low priority
#53 opened Aug 28, 2023 by cmkobel
@cmkobel
Report v3 progress high priority
#44 opened Apr 5, 2023 by cmkobel
4 of 10 tasks
Reach 200 stars on Github
@cmkobel
Some rules should not run when there is only one sample. bug Something isn't working low priority
#41 opened Oct 17, 2022 by cmkobel
@cmkobel
gtdbtk running time should be scaled to number of samples enhancement New feature or request
#40 opened Oct 16, 2022 by cmkobel
@cmkobel
Silly issue with long sample names in phylogeny suggestion Ideas that doesn't necessarily need attention.
#16 opened Jun 4, 2021 by cmkobel
@cmkobel
2
ProTip! Updated in the last three days: updated:>2024-11-25.