IUPAC fix

GATB · Dec 25, 2018 · f4635fd · f4635fd
1 parent 2b4a5a9
commit f4635fd
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Showing 3 changed files with 13 additions and 3 deletions.
diff --git a/test/IUPAC.fasta b/test/IUPAC.fasta
@@ -0,0 +1,12 @@
+>k=21
+RRRRRRRRRRRRRRRRRRRRR
+>should be only one kmer, AAAA...AAA's
+AAAAAAAAAAAAAAAAAAAAAY
+>n
+AAAAAAAAAAAAMAAAAAAAA
+>n
+AAAAAAAAAAAARAAAAAAAA
+>n
+AAAAAAAAAAAAWAAAAAAAA
+>n
+AAAAAAAAAAAAAAAAAAAAAW
diff --git a/thirdparty/gatb-core b/thirdparty/gatb-core
diff --git a/utils/CMakeLists.txt b/utils/CMakeLists.txt
@@ -7,7 +7,6 @@ add_definitions (${gatb-core-flags} " -Wno-ambiguous-member-template")
 
 include_directories (${gatb-core-includes})
 
-#list (APPEND PROGRAMS dsk2ascii filter_by_previous_contigs)
 list (APPEND PROGRAMS dsk2ascii)
 
 FOREACH (program ${PROGRAMS})
@@ -18,5 +17,4 @@ ENDFOREACH (program)
 ################################################################################
 #  INSTALLATION 
 ################################################################################
-#INSTALL (TARGETS dsk2ascii filter_by_previous_contigs DESTINATION bin)
 INSTALL (TARGETS dsk2ascii DESTINATION bin)