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Commits on May 28, 2025

• Don't check tmpdir_prefix existence (#5312)

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  stxue1

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  adamnovak

  authored
  8a67d50

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• Test worker import in CWL (#5290)

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  adamnovak

  and

  stxue1

  authored
  bacc58d

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• Refactor URL access function (#5313)

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  3 peopleauthored
  bc0b1c8

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Commits on May 15, 2025

• Memoize Google client when downloading files. (#5311)

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  stxue1

  and

  adamnovak

  authored
  4cc1707

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• Add missing CWL badges (#5309)

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  stxue1

  and

  adamnovak

  authored
  2ade36e

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• Support relaxing quant checks in WDL (#5308)

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  stxue1

  and

  adamnovak

  authored
  e1e371d

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Commits on May 14, 2025

• Suppress spurious nvidia warnings. (#5307)

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  DailyDreaming

  and

  adamnovak

  authored
  a974612

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Commits on Apr 30, 2025

• Test WDL Restart (#5284)

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  adamnovak

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  a20dc7e

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• Bump version to 8.3.0a1.

  DailyDreaming

  authored
  1780e76

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Commits on Apr 29, 2025

• Update setuptools requirement from <80,>=65.5.1 to >=65.5.1,<81 (#5293)

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  dependabot[bot]

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  40101e2

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Commits on Apr 24, 2025

• History flag (#5258)

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  adamnovak

  authored
  6d02113

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• Handle coercing file: URIs to files (#5266)

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  adamnovak

  authored
  b411599

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Commits on Apr 23, 2025

• Update .gitlab-ci.yml (#5288)

  stxue1

  authored
  e30092c

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• Update setuptools requirement from <79,>=65.5.1 to >=65.5.1,<80 (#5287)

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  dependabot[bot]

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  71f4967

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Commits on Apr 17, 2025

• Restore 3.9 support (#5276)

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  adamnovak

  authored
  f3498d8

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Commits on Apr 16, 2025

• Add message and test for making sure Dockstore accepts our metrics (#5277)

  adamnovak

  authored
  a314ce3

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Commits on Apr 14, 2025

• Add MiniWDL's lint checking to toil-wdl-runner (#5227)

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  stxue1

  and

  adamnovak

  authored
  d0be3e9

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Commits on Apr 11, 2025

• Try to make sure setup.py can import the version template during codegen (#5274)

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  adamnovak

  authored
  e49bdf2

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Commits on Apr 10, 2025

• Add options to pass YAML security context specification into Toil (#5269)

  stxue1

  authored
  2e65ee9

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• GitLab CI: speed up execution (#5235)

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  mr-c

  authored
  d2ff731

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Commits on Apr 3, 2025

• Fix server mode (#5252)

  stxue1

  authored
  9f0d458

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Commits on Mar 31, 2025

• Improve Google Cloud authentication errors (#5263)

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  adamnovak

  authored
  5e4f80c

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Commits on Mar 25, 2025

• Update setuptools requirement from <78,>=65.5.1 to >=65.5.1,<79 (#5257)

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  dependabot[bot]

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  14ae2f8

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• Add feature to stop on first failure (#5244)

  adamnovak

  authored
  c039588

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Commits on Mar 24, 2025

• Update setuptools requirement from <77,>=65.5.1 to >=65.5.1,<78 (#5249)

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  dependabot[bot]

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  23c07df

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Commits on Mar 21, 2025

• Update test threads for badges CI (#5246)

  stxue1

  authored
  abe42e8

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• needs_aws_s3: also skip if there is a proxy error (#5250)

  mr-c

  authored
  b5d2873

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• Make sure wdl_options is available for exports on restart (#5248)

  adamnovak

  authored
  05cc031

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• Hook up credentials for live Dockstore (#5239)

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  adamnovak

  authored
  d1cbc43

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Commits on Mar 20, 2025

• Make tests more independent (#5211)

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  mr-c

  authored
  31b4707

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• Remove unused cache file and try/except (#5238)

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  adamnovak

  authored
  3f9f699

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• Clear batch of files to import when it is full (#5241)

  adamnovak

  authored
  3593c56

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• Revise WDL Docs (#5245)

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  adamnovak

  authored
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Commits on Mar 18, 2025

• Delete files that will longer be accessible at the end of workflows and tasks (#5228)

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  adamnovak

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Commits on Mar 17, 2025

• Attempt to fix the CWL conformance test badge (#5234)

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  mr-c

  authored
  a6d761b

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