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container image caching (like renee cache) for nextflow & snakemake pipelines

enhancementNew feature or requestNew feature or request

Status: Open.

#17 In CCBR/Tools;

· kelly-sovacool opened on Oct 25, 2024

add helper for singularity bind paths

enhancementNew feature or requestNew feature or request

Status: Open.

#16 In CCBR/Tools;

· kelly-sovacool opened on Oct 10, 2024

spooker: add hpc platform to metadata

enhancementNew feature or requestNew feature or request

Status: Open.

#14 In CCBR/Tools;

· kelly-sovacool opened on Sep 26, 2024

spooker: method for determining pipeline version is unreliable

bugSomething isn't workingSomething isn't working

Status: Open.

#13 In CCBR/Tools;

· kelly-sovacool opened on Sep 19, 2024

CLI for installing new pipeline & tool releases on biowulf

enhancementNew feature or requestNew feature or request

Status: Open.

#9 In CCBR/Tools;

· kelly-sovacool opened on Sep 10, 2024

jobby: no path to std_err for jobs in FRCE

bugSomething isn't workingSomething isn't working

Status: Open.

#4 In CCBR/Tools;

· kelly-sovacool opened on May 23, 2024

jobby: snakemake.log.jobby files do not contain localrules

bugSomething isn't workingSomething isn't working

Status: Open.

#3 In CCBR/Tools;

· kelly-sovacool opened on Apr 18, 2024

jobby: report NA for missing cpu_max / mem_max

bugSomething isn't workingSomething isn't working

Status: Open.

#2 In CCBR/Tools;

· kelly-sovacool opened on Oct 6, 2023