📚 Tools and databases for analyzing HLA and VDJ genes.
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Updated
May 9, 2024
📚 Tools and databases for analyzing HLA and VDJ genes.
Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute
Kourami: Graph-guided assembly for HLA alleles
📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.
🐶 hlabud: HLA genotype analysis in R
The IMGT/HLA sequence data persisted in a BioSQL database
Data portal and API for Center for Viral Systems Biology (CViSB) data
Script for generating 3D models of HLA molecules via Meta's ESMFold (https://esmatlas.com)
Docker image for arcasHLA software
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