A Nextflow pipeline for evaluating assembly quality

Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs

A nextflow pipeline for polishing CLR assemblies

A tool to filter BUSCO output into single-copy gene files for phylogenomics

scripts associated with yam genome assembly

Making BUSCO HMMs useable in Anvi'o.

Building a fully automized pipeline for phylogenomic analyses based on the BUSCO toolkit

Run Assembly statistics on a genome assembly (BUSCO and assemblyStats and new_Assemblathon.pl)

A pipeline to construct phylogenetic tree using BUSCOs

Snakemake pipeline to construct species phylogenies using BUSCOs

This pipeline helps to build a phylogenetic tree using the BUSCO results over a group of species/genomes/proteomes/transcriptomes.

Create a SNAP model from BUSCO output

A comparative annotation toolkit (CAT) pipeline for 304 fly genomes.

Docker container for W2RAP based on CentOS

Run multiple metagenome filtering programs using Docker containers