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[CONDA] Package problems when deploying today

bugSomething isn't workingSomething isn't working

Status: Open.

#498 In nf-core/viralrecon;

· tetedange13 opened on May 1, 2025

MAKE_VARIANTS_LONG_TABLE fails in CI build due to no space left on device

bugSomething isn't workingSomething isn't working

Status: Open.

#497 In nf-core/viralrecon;

· heuermh opened on Apr 30, 2025

Use snpeff nf-core modules instead of local modules

Status: Open.

#475 In nf-core/viralrecon;

· saramonzon opened on Mar 21, 2025

Use kraken add fasta build subworkflow instead of local kraken2 build module

Status: Open.

#474 In nf-core/viralrecon;

· saramonzon opened on Mar 21, 2025

Update local modules with nf-test logic

Status: Open.

#473 In nf-core/viralrecon;

· saramonzon opened on Mar 21, 2025

Add new primer schemas to genome config

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

Enhancement

#472 In nf-core/viralrecon;

· saramonzon opened on Mar 21, 2025

 ·  

2.7

Test latest ivar_variants2vcf script

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#470 In nf-core/viralrecon;

· svarona opened on Mar 20, 2025

 ·  

2.7

Test pipeline results with v2.6.0 and with latest software versions

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#468 In nf-core/viralrecon;

· svarona opened on Mar 20, 2025

 ·  

2.7

Fix nf-core lint

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#467 In nf-core/viralrecon;

· svarona opened on Mar 20, 2025

 ·  

2.7

Update nf-core modules to the latest software version

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#466 In nf-core/viralrecon;

· svarona opened on Mar 20, 2025

Fix Local Component Structure

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#465 In nf-core/viralrecon;

· svarona opened on Mar 20, 2025

 ·  

2.7

Update viralrecon for latest artic minion version

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#463 In nf-core/viralrecon;

· svarona opened on Mar 20, 2025

 ·  

2.7