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21 Open 11 Closed
21 Open 11 Closed
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Issues list

Discrepancy between table and alignment output
#33 opened Sep 24, 2024 by cahuparo
data availability for reproducing steps and refactoring
#32 opened Aug 28, 2024 by tavallaie
TypeError: unsupported operand type(s) for +: 'int' and 'NoneType'
#30 opened Jul 18, 2024 by Janehol
KeyError: 'invalid FORMAT: GQ'
#29 opened Jul 9, 2024 by Janehol
1
Mismatching csv output and text alignment output
#28 opened Apr 2, 2024 by buchanri
Options to decrease run time
#27 opened Nov 7, 2023 by buchanri
Error first time an index is built
#26 opened Oct 26, 2023 by zachary-foster
Index is built each time an uncompressed .vcf file is used as input bug Something isn't working
#25 opened Oct 25, 2023 by zachary-foster
place variants in center of acceptable range when possible, but check for other options
#24 opened Oct 18, 2023 by zachary-foster
krisp_fasta csv file improvement
#23 opened Oct 18, 2023 by cahuparo
krisp_fasta: ingroup sequeneces not conserved
#18 opened May 10, 2023 by zachary-foster
Inconsistent results from mergeFiles depending on number of cores
#17 opened May 5, 2023 by zachary-foster
3
Align indel variants in alignment view instead of centering
#16 opened Nov 3, 2022 by zachary-foster
Filter out any sites with Ns in the reference
#15 opened Nov 1, 2022 by zachary-foster Publication
Finish adapting alignment output code for top matches
#13 opened Nov 1, 2022 by zachary-foster Publication
Make user tutorial in README for diagvar
#12 opened Oct 28, 2022 by zachary-foster Publication
Finish implementing all arguments and help menu for diagvar
#11 opened Oct 28, 2022 by zachary-foster Publication
Add automated testing
#10 opened Oct 28, 2022 by zachary-foster Publication
Further avoid low-coverage areas
#5 opened Oct 18, 2022 by zachary-foster
Check for non-target primer matches
#4 opened Oct 18, 2022 by zachary-foster
5
Add mulitprocess-aware status upates
#3 opened Oct 18, 2022 by zachary-foster
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