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More efficient PEtab parameter mapping

performance

PEtabPEtab-import relatedPEtab-import related

Status: Open.

#2639 In AMICI-dev/AMICI;

· dweindl opened on Jan 30, 2025

Remove timepoint overide flattening in jax

enhancement

newNewly createdNewly created

Status: Open.

#2637 In AMICI-dev/AMICI;

· FFroehlich opened on Jan 29, 2025

eqx.debug.backward_nan in master

Status: Open.

#2629 In AMICI-dev/AMICI;

· FFroehlich opened on Dec 16, 2024

JAX preequilibration may silently fail

Status: Open.

#2628 In AMICI-dev/AMICI;

· FFroehlich opened on Dec 16, 2024

Compute log-prior and unnormalized log-posterior in simulate_petab

PEtabPEtab-import relatedPEtab-import related

Status: Open.

#2624 In AMICI-dev/AMICI;

· dweindl opened on Dec 11, 2024

Error for the command : engine = pypesto.engine.MultiProcessEngine()

newNewly createdNewly created

Status: Open.

#2620 In AMICI-dev/AMICI;

· chloweckel opened on Dec 9, 2024

Enable seeding C++ RNG

c++

enhancement

python

Status: Open.

#2599 In AMICI-dev/AMICI;

· dweindl opened on Nov 26, 2024

Update steady state solver notebook

documentation

steady stateRelated to steady-state computation or sensitivity at steady stateRelated to steady-state computation or sensitivity at steady state

Status: Open.

#2582 In AMICI-dev/AMICI;

· dweindl opened on Nov 10, 2024

Redundant/ambiguous information in amici::Model

c++

refactoring

Status: Open.

#2573 In AMICI-dev/AMICI;

· dweindl opened on Nov 8, 2024

Support for sympy expressions for observables and sigmas

enhancement

python

Status: Open.

#2568 In AMICI-dev/AMICI;

· dweindl opened on Oct 24, 2024

GHA: redundant testing in test_python_cplusplus.yml macos_cpp_py, macos_python

ci

Status: Open.

#2567 In AMICI-dev/AMICI;

· dweindl opened on Oct 24, 2024

segfaults with swig4.3 and PYTHONFAULTHANDLER=1

ci

swig

Status: Open.

#2565 In AMICI-dev/AMICI;

· dweindl opened on Oct 24, 2024