Entry - #605583 - DEAFNESS, AUTOSOMAL DOMINANT 25; DFNA25 - OMIM

# 605583

DEAFNESS, AUTOSOMAL DOMINANT 25; DFNA25


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
12q23.1 Deafness, autosomal dominant 25 605583 AD 3 SLC17A8 607557
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
HEAD & NECK
Ears
- Hearing loss, sensorineural, progressive, high-frequency
- Normal vestibular function
MISCELLANEOUS
- Variable severity
- Variable audiometric pattern
- Variable age of onset, ranging from 3 months to over 60 years of age
- Affected male members reported earlier onset and were more severely affected
- Two families have been reported (last curated May 2016)
MOLECULAR BASIS
- Caused by mutation in the solute carrier family 17 (vesicular glutamate cotransporter), member 8 gene (SLC17A8, 607557.0001)
Deafness, autosomal dominant - PS124900 - 75 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.12 Deafness, autosomal dominant 85 AD 3 620227 USP48 617445
1p34.3 Deafness, autosomal dominant 2B, with or without peripheral neuropathy AD 3 612644 GJB3 603324
1p34.3 ?Deafness, autosomal dominant 88 AD 3 620283 EPHA10 611123
1p34.2 Deafness, autosomal dominant 2A AD 3 600101 KCNQ4 603537
1p21.1 Deafness, autosomal dominant 37 AD 3 618533 COL11A1 120280
1q21-q23 Deafness, autosomal dominant 49 AD 2 608372 DFNA49 608372
1q21.3 Deafness, autosomal dominant 87 AD 3 620281 PI4KB 602758
1q23.3 Deafness, autosomal dominant 7 AD 3 601412 LMX1A 600298
1q44 Deafness, autosomal dominant 34, with or without inflammation AD 3 617772 NLRP3 606416
2p21-p12 Deafness, autosomal dominant 58 AD 4 615654 DFNA58 615654
2p12 Deafness, autosomal dominant 43 AD 2 608394 DFNA43 608394
2p11.2 ?Deafness, autosomal dominant 81 AD 3 619500 ELMOD3 615427
2q23-q24.3 Deafness, autosomal dominant 16 AD 2 603964 DFNA16 603964
3p25.3 Deafness, autosomal dominant 82 AD 3 619804 ATP2B2 108733
3q21.3 ?Deafness, autosomal dominant 70 AD 3 616968 MCM2 116945
3q22 Deafness, autosomal dominant 18 AD 2 606012 DFNA18 606012
3q23 Deafness, autosomal dominant 76 AD 3 618787 PLS1 602734
3q28 ?Deafness, autosomal dominant 44 AD 3 607453 CCDC50 611051
4p16.1 Deafness, autosomal dominant 6/14/38 AD 3 600965 WFS1 606201
4q12 Deafness, autosomal dominant 27 AD 3 612431 REST 600571
4q21.22 ?Deafness, autosomal dominant 79 AD 3 619086 SCD5 608370
4q22.2 ?Deafness, autosomal dominant 89 AD 3 620284 ATOH1 601461
4q35-qter Deafness, autosomal dominant 24 AD 2 606282 DFNA24 606282
5q13.2 ?Deafness, autosomal dominant 83 AD 3 619808 MAP1B 157129
5q23.3 Deafness, autosomal dominant 78 AD 3 619081 SLC12A2 600840
5q31 Deafness, autosomal dominant 54 AD 2 615649 DFNA54 615649
5q31.3 Deafness, autosomal dominant 1, with or without thrombocytopenia AD 3 124900 DIAPH1 602121
5q32 Deafness, autosomal dominant 15/52 AD 3 602459 POU4F3 602460
6p22.3 Deafness, autosomal dominant 21 AD 3 607017 RIPOR2 611410
6p21.3 Deafness, autosomal dominant 31 AD 2 608645 DFNA31 608645
6p21.33 ?Deafness, autosomal dominant 72 AD 3 617606 SLC44A4 606107
6p21.32 Deafness, autosomal dominant 13 AD 3 601868 COL11A2 120290
6q14.1 Deafness, autosomal dominant 22 AD 3 606346 MYO6 600970
6q14.1 Deafness, autosomal dominant 22, with hypertrophic cardiomyopathy AD 3 606346 MYO6 600970
6q21 ?Deafness, autosomal dominant 66 AD 3 616969 CD164 603356
6q23.2 Deafness, autosomal dominant 10 AD 3 601316 EYA4 603550
7p15.3 Deafness, autosomal dominant 5 AD 3 600994 GSDME 608798
7p14.3 ?Deafness, autosomal dominant 74 AD 3 618140 PDE1C 602987
7q22.1 ?Deafness, autosomal dominant 75 AD 3 618778 TRRAP 603015
7q32.2 Deafness, autosomal dominant 50 AD 3 613074 MIR96 611606
8q22.3 Deafness, autosomal dominant 28 AD 3 608641 GRHL2 608576
9p22-p21 Deafness, autosomal dominant 47 AD 2 608652 DFNA47 608652
9q21.11 Deafness, autosomal dominant 51 AD 4 613558 DFNA51 613558
9q21.13 Deafness, autosomal dominant 36 AD 3 606705 TMC1 606706
9q33.1 Deafness, autosomal dominant 56 AD 3 615629 TNC 187380
10p12.1 Deafness, autosomal dominant 90 AD 3 620722 MYO3A 606808
11p14.2-q12.3 Deafness, autosomal dominant 59 AD 2 612642 DFNA59 612642
11q13.5 Deafness, autosomal dominant 11 AD 3 601317 MYO7A 276903
11q23.3 Deafness, autosomal dominant 8/12 AD 3 601543 TECTA 602574
12q13-q14 Deafness, autosomal dominant 48 AD 2 607841 DFNA48 607841
12q21.31 Deafness, autosomal dominant 73 AD 3 617663 PTPRQ 603317
12q21.32 Deafness, autosomal dominant 69, unilateral or asymmetric AD 3 616697 KITLG 184745
12q23.1 Deafness, autosomal dominant 25 AD 3 605583 SLC17A8 607557
12q24.31 Deafness, autosomal dominant 64 AD 3 614152 DIABLO 605219
12q24.33 Deafness, autosomal dominant 41 AD 3 608224 P2RX2 600844
13q12.11 Deafness, autosomal dominant 3A AD 3 601544 GJB2 121011
13q12.11 Deafness, autosomal dominant 3B AD 3 612643 GJB6 604418
13q34 Deafness, autosomal dominant 84 AD 3 619810 ATP11A 605868
14q11.2-q12 Deafness, autosomal dominant 53 AD 2 609965 DFNA53 609965
14q12 Deafness, autosomal dominant 9 AD 3 601369 COCH 603196
14q23.1 Deafness, autosomal dominant 23 AD 3 605192 SIX1 601205
15q21.2 ?Deafness, autosomal dominant 71 AD 3 617605 DMXL2 612186
15q25-q26 Deafness, autosomal dominant 30 AD 2 606451 DFNA30 606451
15q25.2 ?Deafness, autosomal dominant 68 AD 3 616707 HOMER2 604799
16p13.3 Deafness, autosomal dominant 65 AD 3 616044 TBC1D24 613577
16p13.11 ?Deafness, autosomal dominant 77 AD 3 618915 ABCC1 158343
16p12.2 Deafness, autosomal dominant 40 AD 3 616357 CRYM 123740
17q25.3 Deafness, autosomal dominant 20/26 AD 3 604717 ACTG1 102560
18p11.32 ?Deafness, autosomal dominant 86 AD 3 620280 THOC1 606930
18q11.1-q11.2 Deafness, autosomal dominant 80 AD 3 619274 GREB1L 617782
19q13.31-q13.32 Deafness, autosomal dominant 4B AD 3 614614 CEACAM16 614591
19q13.33 Deafness, autosomal dominant 4A AD 3 600652 MYH14 608568
20q13.33 Deafness, autosomal dominant 67 AD 3 616340 OSBPL2 606731
22q12.3 Deafness, autosomal dominant 17 AD 3 603622 MYH9 160775
Not Mapped Deafness, autosomal dominant 33 AD 614211 DFNA33 614211

TEXT

A number sign (#) is used with this entry because of evidence that autosomal dominant deafness-25 (DFNA25) is caused by heterozygous mutation in the SLC17A8 (607557) gene on chromosome 12q23.


Clinical Features

Greene et al. (2001) reported a large Czech family in which several members had a nonsyndromic, slowly progressive hearing impairment. The frequencies most commonly affected were over 2,000 Hz. Age at onset varied from before age 20 to the sixth decade.

In a follow-up on the Czech family reported by Greene et al. (2001), Thirlwall et al. (2003) stated that 155 members over 4 generations had been examined. Affected family members typically had high frequency, slowly progressive sensorineural hearing loss with postlingual onset. All of those considered to be affected shared a common haplotype inherited from their mothers. Six unaffected family members had inherited the common haplotype from their fathers. Three male family members with significant hearing loss who did not share the common haplotype were considered to have a phenocopy because they had experienced significant occupational noise exposure.


Inheritance

The transmission pattern of DFNA25 in the families reported by Ruel et al. (2008) was consistent with autosomal dominant inheritance.


Mapping

Using linkage analysis in a large multigenerational U.S. family of Czech descent, Greene et al. (2001) identified a novel locus, DFNA25, for dominant nonsyndromic hereditary hearing impairment. Based on recombinations in affected individuals, they localized DFNA25 to a 20-cM region of 12q21-q24, with a maximum 2-point lod score of 6.82 at recombination fraction 0.041 for D12S1030. Because the deafness in this family was delayed in onset, progressive, and involved loss of high frequencies, the phenotype was similar to presbycusis. For this reason, Greene et al. (2001) suggested that the DFNA25 locus might be a candidate region for presbycusis in the general population.

In a 6-year-old boy with congenital severe hearing loss, developmental delay, and minor anomalies, Petek et al. (2003) identified a de novo deletion in the 12q22-q24.1 region. By FISH analysis, they narrowed the DFNA25 critical region to a 13-cM interval and demonstrated that the derivative chromosome in this boy was paternal in origin.


Molecular Genetics

In the original family studied by Greene et al. (2001) and in an American family of German descent, Ruel et al. (2008) identified a heterozygous ala211-to-val (A211V) missense mutation in the SLC17A8 gene (607557.0001) segregating with autosomal dominant deafness. The mutation was not present in 267 controls. Linkage disequilibrium analysis suggested that the families had a distant common ancestor. The alanine at position 211 is conserved in vesicular glutamate transporter-3, encoded by SLC17A8, across all species and in all human VGLUT subtypes, suggesting an important functional role.

In a 47-year-old Korean man (family SD-38) with DFNA25, Ryu et al. (2016) identified heterozygosity for a frameshift mutation (c.616dupA; 605583.0002) in the SLC17A8 gene. The patient had bilateral severe sensorineural hearing loss. Other family members were said to be affected, but no other DNA studies were performed.


Animal Model

Seal et al. (2008) generated Slc17a8-null mice by homologous recombination in mouse embryonic stem cells. Mice lacking Vglut3 are profoundly deaf due to the absence of glutamate release from hair cells at the first synapse of the auditory pathway. The early degeneration of some cochlear ganglion neurons in knockout mice indicated an important developmental role for the glutamate released by hair cells before the onset of hearing.

Ruel et al. (2008) found that Slc17a8-null mice lacked auditory nerve responses to acoustic stimuli, although auditory brainstem responses could be elicited by electrical stimuli, and robust otoacoustic emissions were recorded. Calcium ion-triggered synaptic vesicle turnover was normal in the inner hair cells of Slc17a8-null mice when probed by membrane capacitance measurements. Later, the number of afferent synapses, spiral ganglion neurons, and lateral efferent endings below sensory inner hair cells declined. Ribbon synapses remaining by 3 months of age had a normal ultrastructural appearance. Ruel et al. (2008) concluded that deafness in Slc17a8-deficient mice is due to a specific defect of vesicular glutamate uptake and release and that VGLUT3 is essential for auditory coding at the inner hair cell synapse.


REFERENCES

  1. Greene, C. C., McMillan, P. M., Barker, S. E., Kurnool, P., Lomax, M. I., Burmeister, M., Lesperance, M. M. DFNA25, a novel locus for dominant nonsyndromic hereditary hearing impairment, maps to 12q21-24. Am. J. Hum. Genet. 68: 254-260, 2001. [PubMed: 11115382, images, related citations] [Full Text]

  2. Petek, E., Windpassinger, C., Mach, M., Rauter, L., Scherer, S. W., Wagner, K., Kroisel, P. M. Molecular characterization of a 12q22-q24 deletion associated with congenital deafness: confirmation and refinement of the DFNA25 locus. Am. J. Med. Genet. 117A: 122-126, 2003. [PubMed: 12567408, related citations] [Full Text]

  3. Ruel, J., Emery, S., Nouvian, R., Bersot, T., Amilhon, B., Van Rybroek, J. M., Rebillard, G., Lenoir, M., Eybalin, M., Delprat, B., Sivakumaran, T. A., Giros, B., El Mestikawy, S., Moser, T., Smith, R. J. H., Lesperance, M. M., Puel, J.-L. Impairment of SLC17A8 encoding vesicular glutamate transporter-3, VGLUT3, underlies nonsyndromic deafness DFNA25 and inner hair cell dysfunction in null mice. Am. J. Hum. Genet. 83: 278-292, 2008. [PubMed: 18674745, images, related citations] [Full Text]

  4. Ryu, N., Sagong, B., Park, H.-J., Kim, M.-A., Lee, K.-Y., Choi, J. Y., Kim, U.-K. Screening of the SLC17A8 gene as a causative factor for autosomal dominant non-syndromic hearing loss in Koreans. BMC Med. Genet. 17: 6, 2016. [PubMed: 26797701, images, related citations] [Full Text]

  5. Seal, R. P., Akil, O., Yi, E., Weber, C. M., Grant, L., Yoo, J., Clause, A., Kandler, K., Noebels, J. L., Glowatzki, E., Lustig, L. R., Edwards, R. H. Sensorineural deafness and seizures in mice lacking vesicular glutamate transporter 3. Neuron 57: 263-275, 2008. [PubMed: 18215623, images, related citations] [Full Text]

  6. Thirlwall, A. S., Brown, D. J., McMillan, P. M., Barker, S. E., Lesperance, M. M. Phenotypic characterization of hereditary hearing impairment linked to DFNA25. Arch. Otolaryng. Head Neck Surg. 129: 830-835, 2003. [PubMed: 12925340, related citations] [Full Text]


Hilary J. Vernon - updated : 05/11/2021
Joanna S. Amberger - updated : 5/31/2016
Patricia A. Hartz - updated : 9/22/2008
Deborah L. Stone - updated : 7/23/2004
Creation Date:
Victor A. McKusick : 1/25/2001
alopez : 05/31/2024
carol : 05/11/2021
carol : 06/01/2016
carol : 5/31/2016
carol : 5/27/2016
carol : 2/19/2014
carol : 9/19/2011
terry : 12/2/2008
alopez : 9/24/2008
terry : 9/22/2008
carol : 7/27/2004
terry : 7/23/2004
joanna : 3/19/2004
mgross : 8/18/2003
mgross : 1/25/2001

# 605583

DEAFNESS, AUTOSOMAL DOMINANT 25; DFNA25


ORPHA: 90635;   DO: 0110555;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
12q23.1 Deafness, autosomal dominant 25 605583 Autosomal dominant 3 SLC17A8 607557

TEXT

A number sign (#) is used with this entry because of evidence that autosomal dominant deafness-25 (DFNA25) is caused by heterozygous mutation in the SLC17A8 (607557) gene on chromosome 12q23.


Clinical Features

Greene et al. (2001) reported a large Czech family in which several members had a nonsyndromic, slowly progressive hearing impairment. The frequencies most commonly affected were over 2,000 Hz. Age at onset varied from before age 20 to the sixth decade.

In a follow-up on the Czech family reported by Greene et al. (2001), Thirlwall et al. (2003) stated that 155 members over 4 generations had been examined. Affected family members typically had high frequency, slowly progressive sensorineural hearing loss with postlingual onset. All of those considered to be affected shared a common haplotype inherited from their mothers. Six unaffected family members had inherited the common haplotype from their fathers. Three male family members with significant hearing loss who did not share the common haplotype were considered to have a phenocopy because they had experienced significant occupational noise exposure.


Inheritance

The transmission pattern of DFNA25 in the families reported by Ruel et al. (2008) was consistent with autosomal dominant inheritance.


Mapping

Using linkage analysis in a large multigenerational U.S. family of Czech descent, Greene et al. (2001) identified a novel locus, DFNA25, for dominant nonsyndromic hereditary hearing impairment. Based on recombinations in affected individuals, they localized DFNA25 to a 20-cM region of 12q21-q24, with a maximum 2-point lod score of 6.82 at recombination fraction 0.041 for D12S1030. Because the deafness in this family was delayed in onset, progressive, and involved loss of high frequencies, the phenotype was similar to presbycusis. For this reason, Greene et al. (2001) suggested that the DFNA25 locus might be a candidate region for presbycusis in the general population.

In a 6-year-old boy with congenital severe hearing loss, developmental delay, and minor anomalies, Petek et al. (2003) identified a de novo deletion in the 12q22-q24.1 region. By FISH analysis, they narrowed the DFNA25 critical region to a 13-cM interval and demonstrated that the derivative chromosome in this boy was paternal in origin.


Molecular Genetics

In the original family studied by Greene et al. (2001) and in an American family of German descent, Ruel et al. (2008) identified a heterozygous ala211-to-val (A211V) missense mutation in the SLC17A8 gene (607557.0001) segregating with autosomal dominant deafness. The mutation was not present in 267 controls. Linkage disequilibrium analysis suggested that the families had a distant common ancestor. The alanine at position 211 is conserved in vesicular glutamate transporter-3, encoded by SLC17A8, across all species and in all human VGLUT subtypes, suggesting an important functional role.

In a 47-year-old Korean man (family SD-38) with DFNA25, Ryu et al. (2016) identified heterozygosity for a frameshift mutation (c.616dupA; 605583.0002) in the SLC17A8 gene. The patient had bilateral severe sensorineural hearing loss. Other family members were said to be affected, but no other DNA studies were performed.


Animal Model

Seal et al. (2008) generated Slc17a8-null mice by homologous recombination in mouse embryonic stem cells. Mice lacking Vglut3 are profoundly deaf due to the absence of glutamate release from hair cells at the first synapse of the auditory pathway. The early degeneration of some cochlear ganglion neurons in knockout mice indicated an important developmental role for the glutamate released by hair cells before the onset of hearing.

Ruel et al. (2008) found that Slc17a8-null mice lacked auditory nerve responses to acoustic stimuli, although auditory brainstem responses could be elicited by electrical stimuli, and robust otoacoustic emissions were recorded. Calcium ion-triggered synaptic vesicle turnover was normal in the inner hair cells of Slc17a8-null mice when probed by membrane capacitance measurements. Later, the number of afferent synapses, spiral ganglion neurons, and lateral efferent endings below sensory inner hair cells declined. Ribbon synapses remaining by 3 months of age had a normal ultrastructural appearance. Ruel et al. (2008) concluded that deafness in Slc17a8-deficient mice is due to a specific defect of vesicular glutamate uptake and release and that VGLUT3 is essential for auditory coding at the inner hair cell synapse.


REFERENCES

  1. Greene, C. C., McMillan, P. M., Barker, S. E., Kurnool, P., Lomax, M. I., Burmeister, M., Lesperance, M. M. DFNA25, a novel locus for dominant nonsyndromic hereditary hearing impairment, maps to 12q21-24. Am. J. Hum. Genet. 68: 254-260, 2001. [PubMed: 11115382] [Full Text: https://doi.org/10.1086/316925]

  2. Petek, E., Windpassinger, C., Mach, M., Rauter, L., Scherer, S. W., Wagner, K., Kroisel, P. M. Molecular characterization of a 12q22-q24 deletion associated with congenital deafness: confirmation and refinement of the DFNA25 locus. Am. J. Med. Genet. 117A: 122-126, 2003. [PubMed: 12567408] [Full Text: https://doi.org/10.1002/ajmg.a.10155]

  3. Ruel, J., Emery, S., Nouvian, R., Bersot, T., Amilhon, B., Van Rybroek, J. M., Rebillard, G., Lenoir, M., Eybalin, M., Delprat, B., Sivakumaran, T. A., Giros, B., El Mestikawy, S., Moser, T., Smith, R. J. H., Lesperance, M. M., Puel, J.-L. Impairment of SLC17A8 encoding vesicular glutamate transporter-3, VGLUT3, underlies nonsyndromic deafness DFNA25 and inner hair cell dysfunction in null mice. Am. J. Hum. Genet. 83: 278-292, 2008. [PubMed: 18674745] [Full Text: https://doi.org/10.1016/j.ajhg.2008.07.008]

  4. Ryu, N., Sagong, B., Park, H.-J., Kim, M.-A., Lee, K.-Y., Choi, J. Y., Kim, U.-K. Screening of the SLC17A8 gene as a causative factor for autosomal dominant non-syndromic hearing loss in Koreans. BMC Med. Genet. 17: 6, 2016. [PubMed: 26797701] [Full Text: https://doi.org/10.1186/s12881-016-0269-3]

  5. Seal, R. P., Akil, O., Yi, E., Weber, C. M., Grant, L., Yoo, J., Clause, A., Kandler, K., Noebels, J. L., Glowatzki, E., Lustig, L. R., Edwards, R. H. Sensorineural deafness and seizures in mice lacking vesicular glutamate transporter 3. Neuron 57: 263-275, 2008. [PubMed: 18215623] [Full Text: https://doi.org/10.1016/j.neuron.2007.11.032]

  6. Thirlwall, A. S., Brown, D. J., McMillan, P. M., Barker, S. E., Lesperance, M. M. Phenotypic characterization of hereditary hearing impairment linked to DFNA25. Arch. Otolaryng. Head Neck Surg. 129: 830-835, 2003. [PubMed: 12925340] [Full Text: https://doi.org/10.1001/archotol.129.8.830]


Contributors:
Hilary J. Vernon - updated : 05/11/2021
Joanna S. Amberger - updated : 5/31/2016
Patricia A. Hartz - updated : 9/22/2008
Deborah L. Stone - updated : 7/23/2004

Creation Date:
Victor A. McKusick : 1/25/2001

Edit History:
alopez : 05/31/2024
carol : 05/11/2021
carol : 06/01/2016
carol : 5/31/2016
carol : 5/27/2016
carol : 2/19/2014
carol : 9/19/2011
terry : 12/2/2008
alopez : 9/24/2008
terry : 9/22/2008
carol : 7/27/2004
terry : 7/23/2004
joanna : 3/19/2004
mgross : 8/18/2003
mgross : 1/25/2001